| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1679 |
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| Symbol | |
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| ID | 4600931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1626261 |
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| End bp | 1627223 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639774452 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_921077 |
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| Protein GI | 119720582 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAACACAA TCCTTCAGGT TCGTGACGCC CGGATATACT ACGCTGTGAA AGGTACAGAG
GTAAAAGCCG TAGATGGAGT TTCATTCGAA GTCCACGAAG GAGAAATACT GGGGATAGTA
GGCGAAAGTG GCAGTGGAAA ATCAACATTG CTAAACTCGC TCGTAAATGT GAGGCCGCCC
ATGAAGTACA TCGGCGGAGA TGCACTGTTT GATGGGAAAA ATCTCTACAG GATGAGCAAG
GAAGAAAAGA AAAGTGTACT CGGCACACGC CTAACGATTA TTCCTCAGTA TGCACTGGAT
GCTCTACCAC CAGTTTTCAG AATAAAGCAG TATCTTGCAG ACTTCGCAAA AACGCATGGA
CTGAGTGAGA GCGAAATAAT TAAGCTGGCA CGAGAGCGGC TTAAGGAGGT CTCGCTGTCC
GAAAAAGTAC TTGATATGTA TCCCATAGAG CTTTCAGGCG GAATGCGTCA ACGCGTAGCA
ATAGTGATAG CCTCCCTAAC ATCGCCTCGG TTGCTACTGG GAGACGAAAT CACCTCCGCA
TTAGATGTGG TCACGCAGAA GGGGATAATG CTCAACATTA GAAGATTTGT CGATGAAGGA
CTTATAGGAT CTGCCGTACT GGTAACACAC GATATATCCC TGATATACCA AGTAGCGGAT
ACAATCATGG TCATGTATGC TGGGAAAGTA GCGGAGATAG CACCAGCAGA GGAAATAGCT
AAAAAACCGC TACATCCATA CACGAACATG CTGATATCAT CTTTAACAAA GCTCGGCGTT
AAGGCTTCTC AGCAGAGACT TTCGGGAATA AAAGGACTTC CACCGAGCCT AGCAAATCCT
CCGCCGGGTT GCCGGTTCGC GCCCCGATGC CCATACGCGG TTGGCAGGTG TAAAAGCGAG
GAGCCCCCAG CAAAAAATGT AGACGGTCAT CTTGTAGCCT GCTGGTTGAG GGGGTGGGAT
TAG
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| Protein sequence | MNTILQVRDA RIYYAVKGTE VKAVDGVSFE VHEGEILGIV GESGSGKSTL LNSLVNVRPP
MKYIGGDALF DGKNLYRMSK EEKKSVLGTR LTIIPQYALD ALPPVFRIKQ YLADFAKTHG
LSESEIIKLA RERLKEVSLS EKVLDMYPIE LSGGMRQRVA IVIASLTSPR LLLGDEITSA
LDVVTQKGIM LNIRRFVDEG LIGSAVLVTH DISLIYQVAD TIMVMYAGKV AEIAPAEEIA
KKPLHPYTNM LISSLTKLGV KASQQRLSGI KGLPPSLANP PPGCRFAPRC PYAVGRCKSE
EPPAKNVDGH LVACWLRGWD
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