| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1672 |
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| Symbol | |
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| ID | 4600924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1618086 |
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| End bp | 1620008 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639774445 |
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| Product | glycoside hydrolase family 42 protein |
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| Protein accession | YP_921070 |
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| Protein GI | 119720575 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3934] Endo-beta-mannanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.590042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACGAAG CGTTCAAGTT CTTACTAGGA GTTAACTACT GGCCTAGACT ATACAACGTA
AAAATGTGGA AAGAATGGGA CGAAGAGAGC CTAAAGAAAG ACATAGAAAA AATGAAAGAA
CTCGGCGTTA GAGTAGTAAG GATATTTTTA AGGGATATAG ATTTTGCGGA TGAGAGAGGA
ATTCCAATTG AAGAGAGTCT GCAGAAGCTA CAAAGATTCC TCGATTTGCT TCACGAGAAA
AACCTCCAGG CATTCGTAAC GTTACTCGTA GGACACATGA GCGGAAAAAA CTTCCCAATA
CCGTGGACCA GCTTCGACAG CCTTTACACC CCCTCTTCCG TGGAGAAGAC CGCTACTTTT
GCGAGAAAAA TAGCAGAAAG GCTGGCATCA CACCCTGCAC TTGCTGGCTG GATACTAAGT
AACGAGCTCA GCTTGGTAAA GAGAGCTACG ACAAGAGAAG ATGCCCTCAG GCTACTCGAA
GCATTTACAA AAACTATGAA ATCCGTAGAC CCAAATCACA TCGTATCCAG CGGAGACATA
CCAGACAGCT TTATGCAAGA AACCCCTAAT GTACGTCACC TCGTCGACTA CGTTGGGCCA
CACTTGTACC TATACGACAC CGATCTCGTA CGGCTTGGAT ACTTCTATGG GGCAATGCTT
GAACTCTTCT CCAACGCAGG AGACCTGCCA GTCATACTTG AAGAGTTCGG CTTTAGTACA
CTACAATTCA GCGAGGAAAG CCACGCGCGA TTTGTGGAGG AAATTCTTTA CACATCTCTA
GCTCACGAAG CTTCTGGAGC GTTTATTTGG TGTTTCTCAG ACTTCACAGA AGAGAGCGGT
GAGCCATACG ATTGGAGACC TTTAGAGCTC GGCTTTGGTT TACTGAAGAA AGACGGTAGC
GAAAAACTAG CAGCAGACTC TTACAGGAAC TTTTCTCATG TGGTCGAAAG AATAGAAAAG
CTCGGACTTC ACTCTAAGTA CAAACGTTTA TCAAGCACTT TTGTAGTTTA TCCATTTTAC
TTATTCAGAG ACTACGAGTT CATATGGTAC AAAGAGTCAC TAGGCTTTTG GGAATCCATA
AAACCGCACT TGATGAGCTA CTCGCTTCTA TCCGCCTCTA GCGTTCCTTC TCGAATGGTT
TACGAGCTAG ACCTGAAAAA GATTTTAAAA AGCGCTAAGC TAGTAGTCCT TCCTTCTGTA
GTAGCTACAC TTGCTTCTAC GTGGCGCAAC CTTCTAGAAT ATGTAGAGCT CGGCGGAACC
CTCTATTCAT CCGTTATCAG GGGAGCCGGT GCTTTCAAAG CCCTCCACGA TGCGCCGACA
CACCTTTGGA ACGAGCTGTT TGGCGTGGAA AACGTTCTAG AGGCAGGCTC CATGGGACGC
AAGATCTTCG GAGTCGTTAA ATTGAAATTC GTCAGGAAAT TTGGCAACCT CAGTGAGGGG
GACGAACTAT TACTAAAAGT ACCAGAAAGC ATCTATACTT TCAAGGCGCA AAGCACGGAC
TCGGACGTAA TAGCCTTGGA TGACGAAGGA GAACCGGTAA TCTTCTTCTC TCGAAGGGGG
CGTGGCAAGA CCATTCTATC GCTGATACCT ATAGAGGTGA TATTACAGGC ACAGGAAAAC
GCTCAATGGC ACGAAGGAAC AATATTTTAT GAACAACTTG CCTTTGTTTC AGAGGTAGAA
AGACGTTATG CTTCAAAGGA TCCTAGAGTC GAGCTACAAG TTTACACGGG AGAAAAGGAC
GATCTTTTAA TAGTGATTAA TCACAGCAAT GAAAATGTGG AGACAAGCAT TACGAGTGCT
ACAAGAATCG TAGAAGCACA AGTAATTGGC GGTAAAGCAA GGCTATTACC AGAGTCGAAG
AGAGAGATGA GAGCTGTATT TCCCCCAAAG TCGGGCTCCA TTATTCGTGT CGTTAAAACC
TAG
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| Protein sequence | MDEAFKFLLG VNYWPRLYNV KMWKEWDEES LKKDIEKMKE LGVRVVRIFL RDIDFADERG
IPIEESLQKL QRFLDLLHEK NLQAFVTLLV GHMSGKNFPI PWTSFDSLYT PSSVEKTATF
ARKIAERLAS HPALAGWILS NELSLVKRAT TREDALRLLE AFTKTMKSVD PNHIVSSGDI
PDSFMQETPN VRHLVDYVGP HLYLYDTDLV RLGYFYGAML ELFSNAGDLP VILEEFGFST
LQFSEESHAR FVEEILYTSL AHEASGAFIW CFSDFTEESG EPYDWRPLEL GFGLLKKDGS
EKLAADSYRN FSHVVERIEK LGLHSKYKRL SSTFVVYPFY LFRDYEFIWY KESLGFWESI
KPHLMSYSLL SASSVPSRMV YELDLKKILK SAKLVVLPSV VATLASTWRN LLEYVELGGT
LYSSVIRGAG AFKALHDAPT HLWNELFGVE NVLEAGSMGR KIFGVVKLKF VRKFGNLSEG
DELLLKVPES IYTFKAQSTD SDVIALDDEG EPVIFFSRRG RGKTILSLIP IEVILQAQEN
AQWHEGTIFY EQLAFVSEVE RRYASKDPRV ELQVYTGEKD DLLIVINHSN ENVETSITSA
TRIVEAQVIG GKARLLPESK REMRAVFPPK SGSIIRVVKT
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