Gene Tpen_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1669 
Symbol 
ID4601251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp1615274 
End bp1615783 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content63% 
IMG OID639774442 
Productmagnesium-dependent phosphatase-1 
Protein accessionYP_921067 
Protein GI119720572 
COG category[R] General function prediction only 
COG ID[COG4996] Predicted phosphatase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01681] HAD-superfamily phosphatase, subfamily IIIC
[TIGR01685] magnesium-dependent phosphatase-1 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCATCA AGGCGCTCGT GGTAGACCTG GACGGCACCC TCTGGTCCCA CAGGGATATC 
TCGCGCACGC GCCCGCCGTT CAGGAGGGTC TCCGACGGCG TAGTCGTAGA CTCCACCGGG 
CAGGAGGTCA GGCTGAACCC CTGCGTCGAG GAGGCGCTGA GAGCCGCTAG GGAGGCAGGC 
TTAAGGCTGG CAGTGGCGAG CTGGAACGAC CCGGAACCCG CCGTCGAGGC TCTGAAGGCA 
CTCGGGGTCT ACGGGTACTT CGACCTCCTA GTGATCGAGC CTCACCCCGG GAAGGACAGG 
ATGCTCGAGA AGATACTCCG AGAGCTACGC CTGTCGCCCG GGGAAGTAGT CTTCGTCGAC 
GACACCGAGT ACATGGTCGA GCTCGTGCGG GAGGCGCACC CCGGGATACT CTCCCTGAGG 
ATGGGGGTGG ACGTGAGGGA TTTCTGCGAG CTTCTACGCA AGTTAAATAT TTTTACGACG 
CAGGGGTTTA GGAGCCGTGG CGAAGGCTAG
 
Protein sequence
MGIKALVVDL DGTLWSHRDI SRTRPPFRRV SDGVVVDSTG QEVRLNPCVE EALRAAREAG 
LRLAVASWND PEPAVEALKA LGVYGYFDLL VIEPHPGKDR MLEKILRELR LSPGEVVFVD 
DTEYMVELVR EAHPGILSLR MGVDVRDFCE LLRKLNIFTT QGFRSRGEG