| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1666 |
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| Symbol | |
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| ID | 4601248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1612873 |
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| End bp | 1613778 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639774439 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_921064 |
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| Protein GI | 119720569 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.458011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGCGCCA GGTTCTACGG AGTGATATCC CCATTCATCA CGCCGTTCAG GGAGGACCTC
TCGCTGGACA GGGAGGCGGT CGCCTGGCTC GCCAGGTACC AGGCCGAGAA GGGGGTTCAC
GGGATCTTCC CGAACAGCAC TACCGGGGAG TTCGTGCACC TATCGAGGGA GGAGGCCGTC
GAGGTAACGA GGCTGGTCCT GGAGGCTGTC GGCGGCAAGG TCTGGGTTAT CCCGGGTATC
AGCGCTAACT ACACTGAGGA CTCCGTCGCT CTCGGGAGAA CCTTCAAGGA CTTGGGGGTC
GACGGCGCCG TGGTTACTCC TCCCTACTTC TTCAAGGTGT CCCCGGAGAG GCTGAAGGTC
CACTTCTCGA CTATCCTCGA AAAGGTAGAC CTCCCGATAA TAGTGTACAA CATACCGGCG
ACTACGGGGA TCAACATACC GGTGGGGCTC TACCTGGAGC TCGCGAAGGA GCACAGCAAC
CTGGCGGGCG CCAAGGCTAC CGTCGAGAGC TTCACCTACT TCCGCCAGCT GGTACAGGTA
GTGAAGGCTG AGAGGAAGGA CTTCGCCGTG CTGACAGGGC TCGACGACCT CCTGCTACCG
GTGCTGATGA TGGGAGGCGA CGGCGGGATA ATGGCGCTCG CAAACGCCGC CCCGCAGATA
CACCGCGAGG TCTACGACGC GTACAGATCC GGGGACCTGA AAAGGGCGTT GGAGGCTTGG
CACAAGCTCT TGAGGCTCGT ACGCGTCTAC GACTACGCCA CCTCCTTCCC GACCTCCGTG
AAGACTTTGC TGAAAGTCAT GGGTGCCCCG GTAAAGCCGT ACGCTAGGAC GCCTCTCACC
CCGGAGACGC GGGAAGTGGA GGAAAAGATA GCGCAGATAG CTAGGGAGCT GGGCCTCAAA
ATATAA
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| Protein sequence | MSARFYGVIS PFITPFREDL SLDREAVAWL ARYQAEKGVH GIFPNSTTGE FVHLSREEAV
EVTRLVLEAV GGKVWVIPGI SANYTEDSVA LGRTFKDLGV DGAVVTPPYF FKVSPERLKV
HFSTILEKVD LPIIVYNIPA TTGINIPVGL YLELAKEHSN LAGAKATVES FTYFRQLVQV
VKAERKDFAV LTGLDDLLLP VLMMGGDGGI MALANAAPQI HREVYDAYRS GDLKRALEAW
HKLLRLVRVY DYATSFPTSV KTLLKVMGAP VKPYARTPLT PETREVEEKI AQIARELGLK
I
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