| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1658 |
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| Symbol | |
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| ID | 4601735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1604310 |
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| End bp | 1605644 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639774431 |
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| Product | rhomboid family protein |
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| Protein accession | YP_921056 |
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| Protein GI | 119720561 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.598011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTGC CGTTTCAGCG AGACTACGAG GACATAGAGA GGCGTGGAGC CCCGGTCACG
CTTGGAATAA TACTCGTAAA CGTGGCGGTC TACCTCGTGT CGAGCTACGA GAACGGCTTC
CTCGCGGTCT CCGACGCCTG GGTTAACGCG TTCGCGTTTG TCCCAGCGTA CTTCGCGAGG
CCCGAGCACC TCTACAGGCT CTTCACTTCG ATGTTCCTGC ACGCCAACCT GGCGCACATA
TTCTTCAACA TGCTTTACCT CTACACGTTC GGGAAGAGCG TCGAGGCAGT CCTCGGTAGC
GAGAGGTACT TCCTGCTTTA CTTCGCGAGC GGTATCCTTG CGAGCGTCTT CCACACGGCG
TTCCTACCCA TAGAGGGCGC GAGCTCGGCT TTCGTGCCGG CCCTCGGTGC CAGCGGTGCT
ATAAGCGGGG TTCTAGGCGC GTACCTCCTG CTGTTCCCGG GGACCAGGCT CACGATGTGC
TTCTTTTACG TATTCATCCC GCTATGCTTC ACCATGAAAG CGGCGGCTTA CCTCGTGTTC
TGGTTCGCGC TACAGATACT GCAGGGGTTC CTGGGGGCTA GCCTCGGCGT CGCGGTATTC
GCGCACGCAG GGGGGTTTAT AGGCGGGCTC GCGCTACTTC CGGTGCTCGT CAGCGAGGAG
AGGATAGGGC TGCTCAGGCT GTACTCTTCG ATGCACTACT TCTTCAGGAA CATATTCTTC
ACTGAGAGGG GCTTCACGAG GCTCAGCAAG GCAGTCGTAG CGGTGCTGAT AGGGCTCGTC
GCGGCCGCGG CAGTCTACTC GGCTGTAGAG GCGGAGACCA CGGGGGGTGT GAACAAGGTG
TTAACGGTGA GCGTCACGGG TAGAGGCGTC AACGATTCTG AAAGCGTGAT AATCCAGCTC
CAGCCGGGCG GAGTCCTGGA CGTCACCCCC ATATCGAGTA GCGGCGTGAG GGTCGTTGTA
AACCGCCTCA GGGCTGCCAA CCTCCTCTAC AACAGCCAGG CCGCCGGAAA GAGTATCTCC
GTGGATAAAA GCCTGAGGGG AGTCGTCAAC GGCTTACCCG TCGAGATAAC GATAAAGGCT
AACCTCTCGT TCGACTCCTA CGGGTTGCTA GACAGGGGGC AGGGCCACGT GACCACCGAC
GTCCTCGCCT GCGATGCCTA CGGCAGGTGC ACCGTTTCGG GTAAGGGTAG CTACGACTTC
TCCGTGAGCA GCGAGGCCAC GATGGCGGGC TTCAAGGGGA TACCCATAGC GGAGCTAGCC
CTTCTCTCGC TGGCTTCGAG CCTGGCCGCC GTGGTCAACG TTCTTAGGGC GGAGAGGTAC
GCGATAGTAG AGTAG
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| Protein sequence | MGLPFQRDYE DIERRGAPVT LGIILVNVAV YLVSSYENGF LAVSDAWVNA FAFVPAYFAR
PEHLYRLFTS MFLHANLAHI FFNMLYLYTF GKSVEAVLGS ERYFLLYFAS GILASVFHTA
FLPIEGASSA FVPALGASGA ISGVLGAYLL LFPGTRLTMC FFYVFIPLCF TMKAAAYLVF
WFALQILQGF LGASLGVAVF AHAGGFIGGL ALLPVLVSEE RIGLLRLYSS MHYFFRNIFF
TERGFTRLSK AVVAVLIGLV AAAAVYSAVE AETTGGVNKV LTVSVTGRGV NDSESVIIQL
QPGGVLDVTP ISSSGVRVVV NRLRAANLLY NSQAAGKSIS VDKSLRGVVN GLPVEITIKA
NLSFDSYGLL DRGQGHVTTD VLACDAYGRC TVSGKGSYDF SVSSEATMAG FKGIPIAELA
LLSLASSLAA VVNVLRAERY AIVE
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