| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1641 |
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| Symbol | |
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| ID | 4600920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1589277 |
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| End bp | 1590737 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639774414 |
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| Product | major facilitator transporter |
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| Protein accession | YP_921039 |
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| Protein GI | 119720544 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATACCG CTCACAAAAA GTATCTACTA ACGGCTCTTT CGATAACAAC GCTCGGAGCG
TTCATGGCAG GCCTCGACGC GCGCATAGTA GTCGTCGGGC TAGACGTGAT AGCCTCAGCC
CTCAAAGCGG ACATCGAGGA AGCGCTCTGG TTCACGCAAG CATACATGCT TGGAAGCACG
CTCATGCTTC TACTCGCGGG GAAGCTCGCC GACCTCTACG GGAGGGTGAA GCTCTACGCA
TACGGCTTCC TGCTGTTCAC CCTGGGGTCA ATCCTCTCCG GAGCCGCCGC GACCCCCCTA
CAACTGGCCG CCTCGCGCTT CCTGCAGGGC CTCGGCGCGG GTGTTCTCAC AACTCTAAGC
GCGACTATAA TCACGGACGT CGCCGTCGGC GGACCCCTTG CCTTTGCGTT GAGCATAAAC
TCTCTAGCCT TCCGCCTCGG GTCAATCCTG GGCTTAACCG CTAGCGGGCT GATAATAGGC
CTTCTAGGTT GGAGGGGCAT CTTCTACGTC AACGTCCCCG TGGGCATAGC CGGGGCAATA
CTCTCCAGGA AGAGGCTCAG GGAGACCTAC ACGCCGCGCG AAAAACCCCT GATAGACTGG
GTCGGCTTCT GCCTTTTCAC GGTCTCGCTC CTAGGCCTCC TGCTAGCCTT AACGTTCTAC
GCCTACGGTC TCTCCTATAG GAGCTTCGCC CGCCTACTCC TACTGGTATC CGCAGCCTGC
TTCCTCCTCT TCATCGCCGT AGAGGCGAGG AGCGACCACC CGATACTCGA CTTATCCCTG
TTCAGGATCT GGGGCTTCAC GGGGGGAAAC ATAGCCCAGT TCCTGAACGC CGTTGCGTTC
GGCGCGGTCA TGCTGCTCTT AACGCTCTAC TACGAGGTCG CCCTGCGGAA AAGCGCTTTC
GAGACGGGGA TAAGCCTCCT CCCCTTCGAG CTCTCGTTCC TCGCGTTCGG GTTGCTGAGC
GGAAGGCTCT CCGACAGGTA CGGCTACGTC AAGTTCGCCA TACTGGGGCT ACTCGTGGGT
AGCCTCGCAC AGCTTCTACT CGGAGGCTTA ACGGTGAGCA CAAGCCCGGC GCTCGTAGCG
GCATACTCGG CACTGCTCGG GGCTGGGAAC GGGCTCTTCC TGTCGCCGAA CACGAGCGCG
ATAATGAGCT CTGTGCCCCC GGAGAGGAGG GGGGTCGCCT CGGCTATTAG AGCCATAGTC
TTCAACGTCG GGATGACTAT AAGCCTGAAC ATAGCGGTAA TACTTATCTC CACGAGGATC
CCCTACGAGA CGGTAACCCA GCTACTCGTA GGAGCAGAGC TAATGACCTC GGACACCGCT
ACCAGCAGGG CGCTCCTTGT CGACGCGATA GCCTACACGT TCAGGGTCCT CGCGCTGGTA
AACCTCTCGG CGGCCCTCTT CTCCTTCACG AGGCTGAAAG GAGGAAAAAC GGGCCGAGCC
CTCCCGGTCC TCGCCGAGTA A
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| Protein sequence | MDTAHKKYLL TALSITTLGA FMAGLDARIV VVGLDVIASA LKADIEEALW FTQAYMLGST
LMLLLAGKLA DLYGRVKLYA YGFLLFTLGS ILSGAAATPL QLAASRFLQG LGAGVLTTLS
ATIITDVAVG GPLAFALSIN SLAFRLGSIL GLTASGLIIG LLGWRGIFYV NVPVGIAGAI
LSRKRLRETY TPREKPLIDW VGFCLFTVSL LGLLLALTFY AYGLSYRSFA RLLLLVSAAC
FLLFIAVEAR SDHPILDLSL FRIWGFTGGN IAQFLNAVAF GAVMLLLTLY YEVALRKSAF
ETGISLLPFE LSFLAFGLLS GRLSDRYGYV KFAILGLLVG SLAQLLLGGL TVSTSPALVA
AYSALLGAGN GLFLSPNTSA IMSSVPPERR GVASAIRAIV FNVGMTISLN IAVILISTRI
PYETVTQLLV GAELMTSDTA TSRALLVDAI AYTFRVLALV NLSAALFSFT RLKGGKTGRA
LPVLAE
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