| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1638 |
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| Symbol | |
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| ID | 4600917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1584637 |
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| End bp | 1586226 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639774411 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_921036 |
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| Protein GI | 119720541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.343389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTAC CCAAACTAGG TAAAAAGGCT GTAGCGGTAG CGGTCGTCGC TCTGGTAGCG
GTCGTCGCCG CCTACGTCGC GCTGGCGCCC AAGCCTCCGA AGTACAAGAA CGTGATAGTG
ATAGGTACCA CGGACTCCGT GCAGACAACG CTCGACCCGT GCGAGGCCTA CGACTACCTC
GGCGTAAACA TAATCCAGAA CATGGGTGAA GGTCTCTTCG GCTACGAGCC CGGCACAGCC
AAGATAGTGA ACAAGCTCGC CGTGAGCTAT ACGATCAGCC CGGACAGGAA GGTCTGGGAG
ATAAAGATCA GGAGGGACGC GAAGTTCCAG GACGGAACCC CCCTCACCGC GCAAGCCGTG
GTCTGGTCCT GGGAGAGGAC GATAAAGCTG AACCAGGACC CAGCTTTCCT GATAGCCGAC
CTCATAGAGA AGGCAGAGGC GGTGTCCGAC GACACTATAC GCGTGTACCT GAAACAACCC
TTCGAGGAGA CCTACGTGAA GTCGCTGCTA GCTACGTGGG TAGCCTTCCC CGTGAACCCG
AAAACCACGC CGATGGAGGT GGTCAAGCCT CCCAACACCG TGGACATGAT AGGGCCGTAC
AAGCTCGCGA GCTGGAAGCC CGGCGAGTAC ATCGAGCTCG TAGCGAACCC GAACTACTAC
GGCGAGAAGC CTAAAACCGA GAGGATTATA ATCCGCTTCT ACAAGGACGC CCAGTCCCTC
AGGCTGGCCG TGGAGAACGG GGAGGTGGAC GTCGCGTTCA GGACGCTCTC GCCTGCGGAC
GTTAAGGACA TAATCGCCAA GGGCCAGCTC CAGGTCGTAA GCGGGCCGGG CATAGCCCCC
ATAAGGTACC TCGTCTTCAA CGTGAAGAAG GAGCCCTTCA ACGACAAGAG GGTGAGGCAG
GCCATAGCCT ACCTGATAGA CAGGAACCAG ATAGTGAACA CCGTGTTCAT GGGGACATTC
GCCCAGCCGC TCTACAGCAT GGTCCCCATA GGCTTCATAG GCCACAAGGA CAGCTTCAAG
GAGAGGTACG GCGACAAGCC TAACGTCGAG GCGGCGAGGC AGCTGTTAAG GCAGGCGGGC
TTCAGCGAGT CCAACCCGCT CAAAATGGAG CTCTGGTTCA CGCCGGTGAG GTACACGCCT
GCCGAGCCGG ACATAGCCGC CATAATAAAG CAGAACCTCG AGGCCAGCGG GATGATAAAG
GTAGAGCTGA AGAGCGCCGA CTGGGCTACG TACAGGTCTC TCTTCAAGCA GGAGAAGATA
GCCGTCTGGC TGCTCGGGTG GTTCCCGGAC TTCCTCGACT CGGACAACTA CGTGAGGCCT
TTCTACCACT CCGGGGCTAA CGGCTGGCTT CACGTGAACT ACAAGAACCC CGTCGTGGAC
GAGCTGATAG ACAAGCAGGT CTTGCAGCCG ACGGAGGAGA GGATTAAGAC CCTCGCGCAG
ATACAGGACA TAGTCGCCGA CGATGCGCCG ATAATCCCGC TCTGGCAGGA GGGTCAGTTC
GCTGTCGCAC AGAAGAACGT GAAGGGGATA GTGCTGGACT ACTCCCAGAT ATTCAGGTAC
TACCTCATAT ACGCCGAAGT GCAGGGCTAG
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| Protein sequence | MPVPKLGKKA VAVAVVALVA VVAAYVALAP KPPKYKNVIV IGTTDSVQTT LDPCEAYDYL
GVNIIQNMGE GLFGYEPGTA KIVNKLAVSY TISPDRKVWE IKIRRDAKFQ DGTPLTAQAV
VWSWERTIKL NQDPAFLIAD LIEKAEAVSD DTIRVYLKQP FEETYVKSLL ATWVAFPVNP
KTTPMEVVKP PNTVDMIGPY KLASWKPGEY IELVANPNYY GEKPKTERII IRFYKDAQSL
RLAVENGEVD VAFRTLSPAD VKDIIAKGQL QVVSGPGIAP IRYLVFNVKK EPFNDKRVRQ
AIAYLIDRNQ IVNTVFMGTF AQPLYSMVPI GFIGHKDSFK ERYGDKPNVE AARQLLRQAG
FSESNPLKME LWFTPVRYTP AEPDIAAIIK QNLEASGMIK VELKSADWAT YRSLFKQEKI
AVWLLGWFPD FLDSDNYVRP FYHSGANGWL HVNYKNPVVD ELIDKQVLQP TEERIKTLAQ
IQDIVADDAP IIPLWQEGQF AVAQKNVKGI VLDYSQIFRY YLIYAEVQG
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