| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1636 |
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| Symbol | |
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| ID | 4600915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1582716 |
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| End bp | 1583597 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639774409 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_921034 |
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| Protein GI | 119720539 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.19302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCGCC CGAAAACCTT CGGGGAGTGG TGCATCCTCG CGGGGGCAGT TCTCACGTCG
CTCGTGGCTC TCCTCGCGGT CCTAGGGGAG GCCCTCGCCC CGGGCAACGC GACCGAGAGC
TACCTCGTCG TAGACGGGAA GGTCTACGAG GTTCCCCCGC TCCTCCCGCC CCTCTCGGAG
GTCAGGCTTG GCTCCAGGAC GGTGGTCTTC CTCATGGGGA CGGATCAGCT GGGCAGGGAC
GTCTTCAGCA GGCTCCTCGC GGGCGCGAGG TTCGTGCTGG CGGTCGCCTT CCTCAGCACG
GCGGTCTCCG CGCTCGTCGG CGTGCTCCTG GGCCTCCTCT CCGGCTACGT GGGCGGGTTG
CTGGACCGGG CCCTCTCGCT CGTCATGGAC AGCCTCTACT CGCTACCCGG CCTTATAGTC
GCCATCGCGC TGGCGGCCCT CCTCGGGACG GGGGTTGTGA ACATGTCGAT GGCGATAGCG
GTAGCCTACA TCCCGTCGTA CTTCCGCATG GTGAGGGGGC AGGTTCTCTC CCTCAAGTCG
GCCCCCTTCG TAGAGGCGGC GAGGGTCGCC GGGGCGGGCC CCCTCGACGT GGCCTTGAGG
CAGATAATGC CGAACACCTT CCCAGCCATA GCCTCCCTGC TCCCCATAAC CTTCGCGGAC
GCGATCATAA CGGAGGCTGG GCTCTCGTTC CTCGGGCTGG GCATAGAGCC TCCCACGCCG
GACTGGGGCT TCGACCTCAA CAAGGGCAGG CAGTTCTTCC TGGCGGGCTA CTGGTGGATA
GGCGTGTTCC CGGGCCTCGC GATAGTCGTC ACGGTGCTCG GCTTCCTCCT CCTCGGCGAG
GGGCTAAACG AGATGCTTAA CCCGAAGAGG TGGCAGGCAT GA
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| Protein sequence | MRRPKTFGEW CILAGAVLTS LVALLAVLGE ALAPGNATES YLVVDGKVYE VPPLLPPLSE
VRLGSRTVVF LMGTDQLGRD VFSRLLAGAR FVLAVAFLST AVSALVGVLL GLLSGYVGGL
LDRALSLVMD SLYSLPGLIV AIALAALLGT GVVNMSMAIA VAYIPSYFRM VRGQVLSLKS
APFVEAARVA GAGPLDVALR QIMPNTFPAI ASLLPITFAD AIITEAGLSF LGLGIEPPTP
DWGFDLNKGR QFFLAGYWWI GVFPGLAIVV TVLGFLLLGE GLNEMLNPKR WQA
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