Gene Tpen_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1634 
Symbol 
ID4600913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp1580790 
End bp1581794 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content65% 
IMG OID639774407 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_921032 
Protein GI119720537 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.666215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGCATG CCACTACGCG TGAACTACTG GTGGTAGAGG ACCTCAGGGT CTACTTCCCA 
GTGAGGAGGA CTCTCGGCGA GATACTCAGA GGGAGGCAGA GGCTCCTCAG AGCGGTGGAC 
GGCGTCTCCT TCTCCCTGCG GAGCGGGGAG ATAATGGCGC TGGTCGGCGA GAGCGGGTCC 
GGGAAGACGA CGGTTGCACG GGCGGTGGTA GGGCTCGTGA AGCCCACCTC CGGCAGGATA 
CTCTTCGACG GTAGGGACAT CTCGAGGCTG GACGGGAGGG AGCTGAGGAG CTACAGGAGG 
AGCGTGCAGA TGGTCTTCCA GGACCCCAGC GTGAGCCTCA ACCCGAGGAT GAAGGTAGGA 
GAGCAGGTGA AGTACCCGCT GGACGTGAAC AAGGTGGGCT CCGAGGACGA GAGGAGGGAG 
GCCGCCCTGA AGGCGCTGGA GAGGGTCGGG CTTGTACCGC CCGAGGACTT CTACTCGCGG 
TACCCTCACC AGCTGAGCGG GGGGCAGAGG CAGAGAGTAG CGATAGCCAG GGCGCTCGTA 
CTGAACCCCA GGCTCCTCCT CGCCGACGAG CCCATATCCA ACGTGGACGT CTCGGCTAGG 
GCCCAGATAC TCGCCCTCCT CAAAAGCCTC CGCGACGAGA GATCCCTCTC CATACTCTAC 
ATAACGCACG ACCTCTCGTC GGCCTGGGCG ATAGCGGACA GCGTCGCGGT CATGTACCTG 
GGAAAGCTCG TCGAGGCGGG ACCCGTTCAA GAGGTATTCA GCAACCCGCT ACACCCCTAC 
ACCAAGGCGT TGCTCTCCGC CGTCCCATCG CTGACGCCCG GCGGCGCGGC CAGGAGGAGG 
GTGACCCTGA AGGGAGAGAT ACCGAGCCCC CTCAACCCGC CCGCCGGCTG CAGGCTACAC 
CCGAGGTGCC CCTTCGCGAC CGAGAAGTGT AGAGCAGAGG AGCCGGCGCT AGCGGAGGCC 
GGGAAGGGCC ACCTAGTCGC GTGCCACCTC TACGCTACTC CTTAG
 
Protein sequence
MSHATTRELL VVEDLRVYFP VRRTLGEILR GRQRLLRAVD GVSFSLRSGE IMALVGESGS 
GKTTVARAVV GLVKPTSGRI LFDGRDISRL DGRELRSYRR SVQMVFQDPS VSLNPRMKVG 
EQVKYPLDVN KVGSEDERRE AALKALERVG LVPPEDFYSR YPHQLSGGQR QRVAIARALV 
LNPRLLLADE PISNVDVSAR AQILALLKSL RDERSLSILY ITHDLSSAWA IADSVAVMYL 
GKLVEAGPVQ EVFSNPLHPY TKALLSAVPS LTPGGAARRR VTLKGEIPSP LNPPAGCRLH 
PRCPFATEKC RAEEPALAEA GKGHLVACHL YATP