Gene Tpen_1631 details

Gene Information

• Locus tag: Tpen_1631
• ID: 4600910
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: -
• Start bp: 1577130
• End bp: 1579073
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639774404
• Product: formate dehydrogenase
• Protein accession: YP_921029
• Protein GI: 119720534
• COG category: [C] Energy production and conversion
• COG ID: [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGGCGC TGAAGTCTGT CTGCCCGAGG GACTGCTACG ACACATGCCA CCTAGCGGTC 
TCGCTGGACG GCGGAGAACT GAGAGTAGCG CCGGACCCGG GCTTCGCGTT TACGGCGGGC 
TTCCTGTGCC CGCGGGGAGC GGTCGAGGCT AGGAGGGTTT TCTCGGCGGG GCGCGTCCTC 
TTCCCGTACA GGAGGGCCGG GGGAAAGCCG GGAAGGAGCT TCGAGAGGGT TGAGTGGGGT 
TCCGCGCTGG ACGAGGTTGC TTCGAGGCTG AAGGAGGTTC TCGAGGAGCA CGGGCCGGGC 
GCCGTTCTGC ACTTAGAGTA CGCTGGGAAC ATGGGGCTGT TGACGTGGTA TTACCCTCAG 
AGGCTCTGGA ACTGGCTGGG CGCGGCGAGG ACTGACTACA GCATTTGCAG TAAGAGCGGG 
CACGAAGCCC TCTCCCTGCA CTACGGCTTG AGCTACGGCA GGACTCCCGA GGAGGCAGAG 
GGCTCGAGGC TCTTCGTGTT CTGGGGCTTT AACGCGAGTG TCAGCTCGCC GCACCTCTGG 
GCCGCGGCGC TGAGGGGGAG GCGTAGGGGG TCCGTGATCG CGGCAGTTGA CCCCAGGAGG 
AGCGAGACCG CGCTGAAGAG CGACTTCGCC GTTCACCCGA GGCCGGGCAC CGACGTCGCG 
CTGGCGTACG GCGTTATCAA CTACCTTATC TCGGAGGGGC TCTACGACGA GGATTTCGTA 
GAGCGCTACA CGGTCGGCTT CGAGGAGCTG AGGAGGGAGG CTTCGAGGTG GAGCCTCTCC 
AGGGTTTCGG GGGTGACGGG TGTAGGCGAG AAGGACGTTG CGAGGCTCGC GGAGCTCTAC 
GCCGAGCTGA AGCCTAGCAC TACCTTCATC GGGTTCGGGG TTCAGAAGGG TGTTAACGGG 
GCGGAGGCTG TGAGGGCAGT CTCCCTTATA CCGGCCCTCG TCGGCCAGCA CAGGGGCTTC 
TACTACTCGA ACAGTAGGAG GTGGCTCGTC GACCTCGCCG CCGTCACGGG CGAGAGGCAC 
GCGCCCCCGG GGAGGGTTGT CAGCCAGGTG GCACTCGCGG AGCTCGTGGA GAGGGGCGAG 
TTCAAGTTCA TCTACGTGTA CAACATGAAC CCCCTCTTGA CGTTGCCGGG GCAGGGTAAG 
CTGAGGAGAG GGCTTAGCAG GAGCGACGTG TTCGTCGTGC TCCACGACAC GCACTGGAAC 
GAGACCGCGG ACTACGCGGA CGTGGTTCTG CCCGCCGCCA CCTACCTCGA GAAGGACGAC 
GTGGTGATCC CCTACGCGCA CGGCTACGTG GCGATGTCCA GGAAGGTTAT CGAGCCCTTG 
GGGGAGAGTA GGAGCGAGGT CTGGGTTACG TGCGAGCTCG CCAGGAGGCT CGGAGCCCCC 
GAGTGGGTCT GCAGGGACCC CCTCGACGTC CTCAGGGAGG CTCTGGGCGG AGCGCTCGAG 
GGAAGCTTCG AGGACCTACT AGCCGGCAAG ACCCTTAGGC TCAAAGCCAG GAGGCTAGAC 
GAGTACCAGA CCCCCTCCGG GAGGATCGAG CTCTACTCGC GGAGGGCCCT CGAGCTGGGT 
TTCAGCCCGC TACCGGTGCA GGGGGAGTAC GACGGGGAGG GCTTCGTCCT CTTAAACTCC 
GCCACGCCCC TCTACACCCA CACGCAGTTC CGCGACGTCT ACGGCCCCAT ACCCGCCGTC 
GTACACGTGA ACCCGGTGGA CGCCGAACGG CTCGGAGTTA GGGACGGGGA CCTCGTCGAG 
CTCTACAACG AGCATGGAAG CGTGGTTGTA AAAGCCCAGG TAACGGAGCT CGTACCCCCG 
GGCGTCCTCT GGTCCCCGCG CCAGCTAGTC GGGCTGGACG GCTCCCCCCA GAACTCGCTC 
GTACCCACGG AGACGCAGAG GATAGGCGGA GGACCGGTCT TCAACTCTAC GAGGGTATTC 
GCGAGACCCG CGCGGGTAAT TTAA 

 

Protein sequence

MAALKSVCPR DCYDTCHLAV SLDGGELRVA PDPGFAFTAG FLCPRGAVEA RRVFSAGRVL 
FPYRRAGGKP GRSFERVEWG SALDEVASRL KEVLEEHGPG AVLHLEYAGN MGLLTWYYPQ 
RLWNWLGAAR TDYSICSKSG HEALSLHYGL SYGRTPEEAE GSRLFVFWGF NASVSSPHLW 
AAALRGRRRG SVIAAVDPRR SETALKSDFA VHPRPGTDVA LAYGVINYLI SEGLYDEDFV 
ERYTVGFEEL RREASRWSLS RVSGVTGVGE KDVARLAELY AELKPSTTFI GFGVQKGVNG 
AEAVRAVSLI PALVGQHRGF YYSNSRRWLV DLAAVTGERH APPGRVVSQV ALAELVERGE 
FKFIYVYNMN PLLTLPGQGK LRRGLSRSDV FVVLHDTHWN ETADYADVVL PAATYLEKDD 
VVIPYAHGYV AMSRKVIEPL GESRSEVWVT CELARRLGAP EWVCRDPLDV LREALGGALE 
GSFEDLLAGK TLRLKARRLD EYQTPSGRIE LYSRRALELG FSPLPVQGEY DGEGFVLLNS 
ATPLYTHTQF RDVYGPIPAV VHVNPVDAER LGVRDGDLVE LYNEHGSVVV KAQVTELVPP 
GVLWSPRQLV GLDGSPQNSL VPTETQRIGG GPVFNSTRVF ARPARVI