Gene Tpen_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1625 
Symbol 
ID4601028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp1571144 
End bp1571875 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content57% 
IMG OID639774398 
Producthypothetical protein 
Protein accessionYP_921023 
Protein GI119720528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.525468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACATAA CGTTGCCCGG CTTCAACGTG CTTGTGGACG TGAAGGGCGA TACGAGCGGC 
GTCGCACTAT CCCTAGCCGG GAATCAATGG TTCGTGGTCG ACGAACTCGT ACACTACCTG 
AACTCGCTAG GCTTCACCGT TTACGTCGAG ACGATACCGC CGGGGCTGGT CAGGGAGAGA 
GCCCTGGGGA AGGCTCTTAG AGTTGGAGCT TTAACTGTAA ACCTGAGGCC CGAGATAGTC 
TCGCTACCCC CGCAGATGCT TGCCGGTATC CCAACGGTGG ACACGTTCGA GTACGCGGAG 
AGCGAGGTAG CTGTAGCTTA CCAGGGGAAG CCGGTGGAGG ATCTGTGCGA CATTAGGAAT 
AGGAGAGTTG CGATCCCCAA CCCCGTGACA GAGGGTATAG GCGCGTTGCT CAGGGACATG 
TACAGCGAAG CGTGCGGAGA CTACCTGGAA CTAATCACTA AAGGCTCCGT ATACCTAACC 
AGGATACACC ACAGAGAGAT ACCGGAGCTT ATGAGGCACG GAGTGGTAGA CGCGGGGGTA 
ATGTGGGTAA CCGAGGCAAG GTACTGGGGC CTACCGTACT TCGCGCCGAG CACGGGGAGG 
AGGGGGAAAC TGGTCTTCGC GTTGCTACCT TGGGCCACGG ATAAAGCCAG GCAGCTCTTC 
AGGCAGTTGC GTAGCCAAAA AGTCAAAGAG ATCTACGAGA AGTACGGCTT TAAGTGGATA 
GCCCAGCCAT GA
 
Protein sequence
MDITLPGFNV LVDVKGDTSG VALSLAGNQW FVVDELVHYL NSLGFTVYVE TIPPGLVRER 
ALGKALRVGA LTVNLRPEIV SLPPQMLAGI PTVDTFEYAE SEVAVAYQGK PVEDLCDIRN 
RRVAIPNPVT EGIGALLRDM YSEACGDYLE LITKGSVYLT RIHHREIPEL MRHGVVDAGV 
MWVTEARYWG LPYFAPSTGR RGKLVFALLP WATDKARQLF RQLRSQKVKE IYEKYGFKWI 
AQP