| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1623 |
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| Symbol | |
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| ID | 4601026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1569171 |
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| End bp | 1570187 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639774396 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_921021 |
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| Protein GI | 119720526 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.215019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACAAAA TAGCTGTTGT TAATTCAAGG TCTTTCGGGG TAATTGCGCC CGATGTTCTA
CAAAAATTGC AGGAAGTGGC TCAGATCGAT TTTATCGACG TCGAAAAAAC TCTGAGAGGT
AAAGCGCTAG CTGAAAAGCT CGAAGGATAC CATTTCATCA TTGCTAGTGT AACTCCTCTC
TACGATAGAG AGTTCTTCGA GAACAACCGA AGCTTATTGC TCATAGCAAG GCATGGGATC
GGTTACGATA ACGTAGATGT AGATGCGGCG ACAGAGCAGG GCGTAATAGT TACAAGGGTT
CCTGGATCAA GAGAGAGAGA CGCTGTGGCG GAACTTGCTG TGGCCTTGTG CCTAAACGTA
GCGCGTAAGG TTTGCCAGGC CGCCACGCTG GTTCGAGAGG GAAAATGGGC TGAGAGGGGT
AAAATTGTCG GTGTTAATAT CTCAGGAAAG ACTGTTGGCA TAATCGGTTT AGGGAACATT
GGTAGTAGAG TTGCAGAAAT TTTCTCTAGA GGTTTCAATG CCAAAGTTGT AGCGTACGAC
CCATTTGTAG GAAAAGACTA TGCCGCCCGG TTTGGAGCCG AGCTTGTAGA TCTGGATACG
CTCCTAAGGG AGTCCGATAT AATACTGCTA CATGCACCTC TCACGAAGGA AACATACCAC
ATGATCGGCG AGAAAGAGAT AGATAAAATG AAGAAAGGAG TCATAGTAGT AAATACTGCT
AGAGGCGAGC TGATAGATAC TAATGCTCTT ATAAAGGGCT TAGAGTCGGG AAAAATTGCA
GGAGTAGGCC TTGACGTCGT AGAAGGAGAA CCCATAGGAG CAGATCATCC TCTGCTAAAG
TATAGAAACG TCGTTATCAC GCCGCACATA GGTGCAAATA CCTACGAGGG ACTCAGGGGG
ATGGACGAAG CCAATGCTGA TGCAATACTA AAGGTTATCC GCGGAGAAGC ACCGCTTGAG
TACATGGTAA ATCCAGAGGT TCTTAAGAGG GGTACCAGGG CTAATCTAAG AACTTAG
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| Protein sequence | MYKIAVVNSR SFGVIAPDVL QKLQEVAQID FIDVEKTLRG KALAEKLEGY HFIIASVTPL
YDREFFENNR SLLLIARHGI GYDNVDVDAA TEQGVIVTRV PGSRERDAVA ELAVALCLNV
ARKVCQAATL VREGKWAERG KIVGVNISGK TVGIIGLGNI GSRVAEIFSR GFNAKVVAYD
PFVGKDYAAR FGAELVDLDT LLRESDIILL HAPLTKETYH MIGEKEIDKM KKGVIVVNTA
RGELIDTNAL IKGLESGKIA GVGLDVVEGE PIGADHPLLK YRNVVITPHI GANTYEGLRG
MDEANADAIL KVIRGEAPLE YMVNPEVLKR GTRANLRT
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