| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1622 |
|---|
| Symbol | |
|---|
| ID | 4601025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1567675 |
|---|
| End bp | 1569174 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639774395 |
|---|
| Product | carbohydrate kinase, FGGY |
|---|
| Protein accession | YP_921020 |
|---|
| Protein GI | 119720525 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAC TAGCAGTAGA CGTTGGCACT AGTACTTTAA AGTCAGCGCT GGTTGATCTC
GAGAAAGGAG TTACCGGCTT TGTGAGGAAA GAAATACCTA TTCTTAGGCC GGAGCCCGAA
GCTGCAGAGC ACGATCCAGA AACTCTTTTC AGAATGGTAT TGGAGAACCT AAAGGAAACT
TTAGCGAAGG CCGGAGTCAG CGAAGTGGAT TGCTTGGTGC TTTCAGGGTA CCTCTTTGGC
GTGTTGGCTC TCGATAGCAA AGGAGAACCG CTTACGAATG TTTTAACCTG GCTGGACAGA
CGGGCTACAA GGACGCTGAG AACCTTATTC CAGGTTCTCA ACCCCGTGGA CGTTTATCGG
AGAACCGGGT GCCCACCTCT ATTCATTTAC CCGCTCGCAA AGATTTTTTG GCTGAAAACC
GCTAGAGAAA ACACTTATCG TGCAACAAAA CGCTTTCTAG ATGCTAAAGG GTACTTACTG
CTACGCCTTA CCGGAGAAGA AGTTATGGAA GTAAGCTCTG CCTCAGGATC TCAGCTCCTC
AACCTAGAGA GAAAGGACTG GGACCACGAG ATAATTCACA GCGCAGGATT GGACCTCGAT
AAGCTACCTC AGCTCGTAGA GCCAGATACT ATTGTTGGAG ACGTGCCAGT CAGCATTGCG
AGAAGCATCG GGCTGAAATC GCCCGTACCA GTAGTAGCAG GAGTATTTGA CGGGGCAGCA
GTGTCTTTAG GACTGGGTGG ACTTGAGGAA GACGTAGCTA CCTCTCACCT ATCTACCAGT
ACTATGCTCA GAGTGGCGAG CAGGATTCCC GTTATAGACT CTTCTCCGAA AATGCGTTTT
CAAACGTACT ACTCTCTACG CGGCTATTGG CTACCCGGTG GTGCCGTGAA CAGCGGAGCT
GTTGTCCTGA GATGGTTTAG GGACAATTTC GCACAACTAG AAAGACTGGT AGCGCAAGAA
CTGGGGGTGA GCGAATACGA GTTACTGGAC AATGAGGCGG CGCTATCTCC TCCGGGCTCT
AACGGGGTAG TCTTCCTCCC GTATATCAGC GGAGAAAGAT TTCCAGAATT TGGGAACAAT
GCTAGCGGCG TTATTTACGG TTTGCGAGAA TGGCATACAA GGAAAGATGT GCTACGCGCC
ATAATGGAGG GAGTAGCATT TAACTTAAAC CTTGTTAACG AAGCTCTAAG AGAGAACGGT
CTGAGCTTCA GAGAAGTGAG AATCACGGGT GGAGGTGCTA ACTCGCGGCT ATGGCTACAA
ATACTCGCCG ACGTACTCGG AGTACCCATA AAGGCATTTA CCAAAGGAGA TGCGGCGCTA
CTCGGTTCCT CGTTTGTAGC GAAAATTGCA ATAGAGGGTA ACGCCGCCGG AGTAGAGCAT
TTAGTCAAGT TCGATAAAAC CGTTGAGCCG ATACCAGAAA ATCAGCGAAT ATACATGGAA
AGGTTTAAAG AGTTCAAGTA CCTGCTAAAT GCGTTGCTTC CCATGTTCTC CGCGCGCTAA
|
|---|
| Protein sequence | MKILAVDVGT STLKSALVDL EKGVTGFVRK EIPILRPEPE AAEHDPETLF RMVLENLKET
LAKAGVSEVD CLVLSGYLFG VLALDSKGEP LTNVLTWLDR RATRTLRTLF QVLNPVDVYR
RTGCPPLFIY PLAKIFWLKT ARENTYRATK RFLDAKGYLL LRLTGEEVME VSSASGSQLL
NLERKDWDHE IIHSAGLDLD KLPQLVEPDT IVGDVPVSIA RSIGLKSPVP VVAGVFDGAA
VSLGLGGLEE DVATSHLSTS TMLRVASRIP VIDSSPKMRF QTYYSLRGYW LPGGAVNSGA
VVLRWFRDNF AQLERLVAQE LGVSEYELLD NEAALSPPGS NGVVFLPYIS GERFPEFGNN
ASGVIYGLRE WHTRKDVLRA IMEGVAFNLN LVNEALRENG LSFREVRITG GGANSRLWLQ
ILADVLGVPI KAFTKGDAAL LGSSFVAKIA IEGNAAGVEH LVKFDKTVEP IPENQRIYME
RFKEFKYLLN ALLPMFSAR
|
|---|
| |