| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1613 |
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| Symbol | |
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| ID | 4601905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1558551 |
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| End bp | 1559612 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639774386 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_921011 |
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| Protein GI | 119720516 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.112161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCGTA TCCCGGGTGG CAAGGGGGTC GTAGAGCTAG CGGACGGCCA GGGGGGCGTG
GAGACCCTCA GGCTCCTCGA GGAGCTCTTC TTCAGGAGGG TGAAGGAGCA CCTCAAGAGG
GTGGAGGGGG GCGTCGGGAT AGATTTCCCG GACGACGGCG CGCTCATACC CCTGCCCGGC
GGGGGCTTCC TCGTCGTCAC GGCGGACTCT TACACCGTGA ACCCTCCGTT CTTCCCGGGC
GGGAACATAG GTAGCCTCGC GGTTCACGGA TCGATAAACG ACGTCGTGAT GATGGGCGGG
AGGCCTGTCG CCATGCTCGA CACTATAGTG GTCGAGGAGG GCTTCCCGAT GGGCGACCTG
GAGGCCATCG TCAACTCTAT GCTCGAGGCG CTCGAAAAGG AAGGTGTGCC GCTGATAGGC
GGGGACTTCA AGGTCATGCC GAAGGGCCAG CTCGACAGGA TAACTGTGAC CACGGTGGGG
CTGGGGGTTG CGCGTAGCCC CATAGTCGAC AAGCCGAGGG GCGGCGACAA GATAGTCGTC
ACGGACTACG TCGGGGACCA CGGCGCGGTC ATCCTGATGC TCCAGATGGG GATGGGGGAC
GTCGAGGAGA TAGCGAGCGG TTCTCTGAAG AGCGACTCGA AGCCCCTGAC GCCGCTACTA
CCTGTCTTCG AGAAGTTCGC CGGGTACATC CACGCGGCGA GGGACCCGAC CCGCGGGGGG
CTCGCGGGTG TTCTGAACGA GTGGGCTAGG AGCGGCGGGC TCCTGGCTGT CATCAGGGAG
GAGGAGGTGC CGGTGCGGGA CGCCGTCAGG AGGTTCGCGG AGATGCTCGG CGTAGACCCC
CTCTACCTCG CGAGCGAAGG CGCAGCGGTC CTCTCGGTCT CCCCCGAGGT AGCCGAGGAA
GTAGTCTCCG AGCTCAGGGG GAGGGGTTTC CCGAACGCGA GGGTTATCGG GGAGTTCCGC
GAGAACCCCA AGTACAGGGG CTTTGTCGTC TCCGAGACGG GGGTCGGCGG GCACAGGATT
ATCGAGCCAC CTAGAGGGGT CATTGTCCCC AGGATATGCT GA
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| Protein sequence | MRRIPGGKGV VELADGQGGV ETLRLLEELF FRRVKEHLKR VEGGVGIDFP DDGALIPLPG
GGFLVVTADS YTVNPPFFPG GNIGSLAVHG SINDVVMMGG RPVAMLDTIV VEEGFPMGDL
EAIVNSMLEA LEKEGVPLIG GDFKVMPKGQ LDRITVTTVG LGVARSPIVD KPRGGDKIVV
TDYVGDHGAV ILMLQMGMGD VEEIASGSLK SDSKPLTPLL PVFEKFAGYI HAARDPTRGG
LAGVLNEWAR SGGLLAVIRE EEVPVRDAVR RFAEMLGVDP LYLASEGAAV LSVSPEVAEE
VVSELRGRGF PNARVIGEFR ENPKYRGFVV SETGVGGHRI IEPPRGVIVP RIC
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