| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1604 |
|---|
| Symbol | |
|---|
| ID | 4601535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1552471 |
|---|
| End bp | 1552977 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639774377 |
|---|
| Product | nuclease |
|---|
| Protein accession | YP_921002 |
|---|
| Protein GI | 119720507 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTGG GATTTCGCGG GGAGACGGTG TTCCCCGAGT GTTGCAGGCA CCTGTTTAGA
AGCCCCGAGC TATCAGGCGT CATCAACTTG GAGAGAGACT TCCTCTGCTG CGCCGAGGAC
TACCCAGTCG CGCTGGTGCC CATCGGGCTA CTTAGGCCTC ACGAAGAGGT AGACCCGTCG
AGGCTGAGGT CGCTCGAGGA GGAGATCCTC GGCGCCGGAT ACCTTGAGAG ACCTGTACTC
GTGGAGTGCG AGACGCTGAT AATTCTCGAC GGGCACCACA GGGTCGCCGT TCTCAGGAAG
CTGGGGAAGA CTGTGGTTCC AGCGTTGCTG GTTAGCTACG AGGATCCGTG CGTGAGCGTG
GACAGCTGGA GGAGCGACTG GGTTGTAACC AAGGACCTCG TTATTAGAGC CGGGTTTACC
GGGAAGCTAC TCCCCCACAA GACTAGCAGG CACCGCCTGT GCTTCGAGGT ACCGGAGGTG
AGGTACCCTC TGTCCATGCT GAGGTGA
|
|---|
| Protein sequence | MTVGFRGETV FPECCRHLFR SPELSGVINL ERDFLCCAED YPVALVPIGL LRPHEEVDPS
RLRSLEEEIL GAGYLERPVL VECETLIILD GHHRVAVLRK LGKTVVPALL VSYEDPCVSV
DSWRSDWVVT KDLVIRAGFT GKLLPHKTSR HRLCFEVPEV RYPLSMLR
|
|---|
| |