| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1560 |
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| Symbol | |
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| ID | 4600909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1510376 |
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| End bp | 1511410 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639774333 |
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| Product | ABC transporter related |
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| Protein accession | YP_920958 |
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| Protein GI | 119720463 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0503147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCCAT CGAGTATGGG CGAGGGGGTT GGTAGAAGCT CCTGCATCGT TGTCCGAGGA
GTCTCGAAGG TGTTTAGCGG CGGGGTCAGG GCGCTCGACG GCGTCTCGAT GGTGGTCGAG
GAGGGAGAGA TACACGCCGT GCTGGGGCCC AACGGCGCCG GGAAGACTAC GCTCATGCGT
GTACTAACCA CGCAGATCAA GCCTTCCAGC GGCGATGCGT GGGTTCTGGG CCGCCACGTC
GTTAAGGAGG CGGCGAGGGT GCGGGAAGTC ATAGGGTACG TGCCGCAGGA GTTCTCGGTG
TGGACGGACC TTACGGGCTA CGAGAACGCC ATGATATACG CGAAGCTCTA CGGGGTTCCT
CCGAGCGAGA GGAGGAGGGT CGTCGAGGAC ATGCTCGAGT TCATGGGCCT GGGGGAGGCT
AAGCACAGGC TTGTGAAGAC GTACTCCGGG GGGATGATTA GGCGCTTAGA GCTCGGGATA
GCGCTGATGA CCAAGCCGCG CGTCCTGTTC CTCGACGAGC CCACCATAGG GCTTGACCCC
CGCGCGAGGG AGCTCGTGTG GTCCAGGATT CTGGAGTACG CGGGGGAGGG CGGCGTGACG
GTAGTCTTCA ACACGCACTA CATGGACGAG GCGGAGAGGT TTGCGGGCAA GGTCACCGTG
ATGAATAGGG GGAGGGTTAT CGCCGAGGGG GCTCCGAGAG AGCTCGTAGA GAAGGCTGGG
GGCGGCGCAA CCGTGAAGAT CGAGTTCGAC GGCGAGCTGG AGAAAGCCCT GGGAGCCCTG
TCGGGGGTTA GGGGCGTCGA GGTGGTCTCC GCCGGGAACC CCGTCGTACT GAGAGTCGAG
GACCTCGAGG TACAGGTAGC CGGAGTGTTC AGGGCGCTCC TGGGCAACGG GGTCAACGTG
AAGAAAGTGA GCCTACAGCC CCCCTCTCTC GAGGACGTCT TCCTCAGGCT TACGGGTATG
ACGTTCGAGG AGGCAGAGAG GTCTAGCCTG AGGGAGGTGG CCGCCACCCG TAAGGCTATA
GGAAGGGGTG GTTGA
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| Protein sequence | MAPSSMGEGV GRSSCIVVRG VSKVFSGGVR ALDGVSMVVE EGEIHAVLGP NGAGKTTLMR
VLTTQIKPSS GDAWVLGRHV VKEAARVREV IGYVPQEFSV WTDLTGYENA MIYAKLYGVP
PSERRRVVED MLEFMGLGEA KHRLVKTYSG GMIRRLELGI ALMTKPRVLF LDEPTIGLDP
RARELVWSRI LEYAGEGGVT VVFNTHYMDE AERFAGKVTV MNRGRVIAEG APRELVEKAG
GGATVKIEFD GELEKALGAL SGVRGVEVVS AGNPVVLRVE DLEVQVAGVF RALLGNGVNV
KKVSLQPPSL EDVFLRLTGM TFEEAERSSL REVAATRKAI GRGG
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