Gene Tpen_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1536 
Symbol 
ID4600378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1483986 
End bp1484654 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content63% 
IMG OID639774310 
Producthypothetical protein 
Protein accessionYP_920935 
Protein GI119720440 
COG category[R] General function prediction only 
COG ID[COG1811] Uncharacterized membrane protein, possible Na+ channel or pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGGAA CCCTGGTAAA CACGCTGACC GTGCTGGCAG GGTCCCTCGT CGGTTTGCTC 
CTCAGGAAGA GCGTGAACGC CGAGAGAGTA GCGTTTGTCG CCGACGTGCT TGGGCTTTTC
ACAGTGGCGA TCGGGGTTCA AATGGCGCTC CAAGCGAGAA AGCCCGTGGC GATGATAGTC
TCGTTGCTCC TCGGCTCCCT GGTGGGCGAA GCCCTCGGCG TGGAGGGAGC TCTTCAGAGG
CTTTCGGAGA GAGTATCGAG GACGAGGTCC CAGGGCGTGG TCGACGGGAT GCTCACAGCC
TTCCTGACGT TCTGCGTGGG GCCAATGACC GTAGTGGGGT CTATCAGGGA CGGCTTGGGA
GACCCGAGCA TACTGCTGGC AAAGTCCGTC ATGGACGGCG TCGCATCGGT TGCCTACGCC
GCGGCTATGG GTGTAGGCGT GGTGTTTAGC TCCGTCTTGG TGCTGGCCTT CCAGGGATCC
CTGGCGTTGC TCGGAGCGCT GACGGGGGCG CTCCTGCCAG AGGCGTCGGT GAACGAGCTG
ACCGCGGCAG GCGGAGTGCT CCTAATAGGC GTAGGCATCA ATTTGTTGAA GCTGAAGAGG
ATCCGCGTGG GGAACATGCT CCCGGCGCTC CTGCTGGCAC CAATCCTGGC GCTGACGGGC
ATGCCTTAA
 
Protein sequence
MLGTLVNTLT VLAGSLVGLL LRKSVNAERV AFVADVLGLF TVAIGVQMAL QARKPVAMIV 
SLLLGSLVGE ALGVEGALQR LSERVSRTRS QGVVDGMLTA FLTFCVGPMT VVGSIRDGLG
DPSILLAKSV MDGVASVAYA AAMGVGVVFS SVLVLAFQGS LALLGALTGA LLPEASVNEL
TAAGGVLLIG VGINLLKLKR IRVGNMLPAL LLAPILALTG MP