Gene Tpen_1534 details

Gene Information

• Locus tag: Tpen_1534
• ID: 4600376
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1482337
• End bp: 1482912
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 639774308
• Product: hypothetical protein
• Protein accession: YP_920933
• Protein GI: 119720438
• COG category: [S] Function unknown
• COG ID: [COG4720] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.204785
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCTACAG AGCTAAAGCG TTCAAGAAAA GTGCTGTCTA CTACAGATAT TGTCGCCATG 
GGTATTGGAA CGGCGCTCTA CGCTGCCTTC AACGTTTTCT TCAACATTCT CCAGATACCT 
GGATCACAAC TCGTCTCCGT GCGTCCCAGC GTAAGTATAC CCATGTTCTT CGGCCACGTA 
TTCGGCCCAG TTGTAGGCTT TGTAGTGGGG TTTCTCGGAA ACACGATAAG TGACGCTGTG 
AGCTGGGGAG GTTTCTGGTG GAACTGGGAC GTGGGCAACG GGCTCCTCGG ACTGATATCC 
GGGCTGGCAT CGTACATTAT TAAGCGCGAA GAGCTACTAG AGAAGAAGGG GTTAATGGTA 
GCGTCGGTAC TCGCAGTCGT AGGATCTATA GTCGGCATGG GCTTCGCGTC CTTTACTGAC 
TACATTTTCG GGTATGGGAT ATCTACGATC GAAGAGGCAA TATACGCGTT GTTCCTACCA 
GCCGCTGTGA CCGACGCCGT TAACGGCGCC ATACTCACCC CTGTCTTGAT CAAAGCTTAT 
AGTGCGGCGG TAAAAGGCAG GTCTAGGAGA ACCTAG 

 

Protein sequence

MATELKRSRK VLSTTDIVAM GIGTALYAAF NVFFNILQIP GSQLVSVRPS VSIPMFFGHV 
FGPVVGFVVG FLGNTISDAV SWGGFWWNWD VGNGLLGLIS GLASYIIKRE ELLEKKGLMV 
ASVLAVVGSI VGMGFASFTD YIFGYGISTI EEAIYALFLP AAVTDAVNGA ILTPVLIKAY 
SAAVKGRSRR T