| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1526 |
|---|
| Symbol | |
|---|
| ID | 4600663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1472484 |
|---|
| End bp | 1474061 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639774300 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_920925 |
|---|
| Protein GI | 119720430 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAA CCGTTCTAGC CCTCTCGATA GCCATGCTCG CGCTGGCAGG CGCCTACGCC
GCCGTCACGA TAATCAACCT GACGGAGTGG CACGTCCAGG CGACCCAGCC CCCCGTCAAG
AAGCTAGCCG CTTACGGAGT CAAGAGAACC GCCGCGTACG CGCAAGCGGA GAACGGCTTA
AACGTGACGT ACGTCGAGGT GACTGCGCCG CTCGGTTGCA GGGTCATTTT CGACCCAGCA
CTAGTCCTGT CCGCTTCAAC CAATCTACCC GCGAAACTAT ATGCGGAGTC CGTAACCGGT
AACTACGCGT TTCAGCTATC GGTAAACGTA AGCCTCGGCG GCACGCAACA AGTACAGGTA
GTAAGCGGGT CGATAACGCA GAGTGCCGGC GCGCCTGTAA GCGTGCAGGG AAGCGCGAAC
TTCAGGCTAG AAGTCCTCGT GGGCTCTGGA GCACCTCTGG GCTCGGAAGT CGCCAGGCTC
TACACGTGGC TTTACTTCAA TGCAAGCACG TCCAAGGCTA GGCAGAAGAT AGTCTGGGTA
TTCAAAACAA TGAGCTGGCT CTACTGCGGC TGGCTGTATA GGAAGGGCCA CGACATTGTT
GGCTCTACTG CGGGGGCTGT TTCCGGCTAC CAGGTGAGGC TCAGGGTGTG TAGTGGTAGC
GGGACTGACT CGGGGGATAC TGTCTACTTG AACGGGAAGG GGAGGGCGGA CTTCGGGGAC
CTCAGGTTCT CGTACCTCCA GCCCGACGGG AGAGAGGTAG CTATACCGTA CTGGGTGGAG
AGCGTTAGCG GCGGCTGCGC CACCGTATGG GTGAAGGTGC CGAGCATACC TGCCAGCCCC
GGGACAGCCA GGATATACGT CTACTACGGA AACCCCTCTG CTACTAGCGA GAGCAACGGA
GCGGCGACGT TCATCTACTT CAACGACTTC TCGAGCGCCA TAGGTTTCAC GAGCTTCCCA
TACGACAAGG GGGCGGACGG CTGGGGCGAC GTGGACGGTA GCGACTCTTC TGGCTGGCAG
CTCTTCCAGG GGGCTCTCAA GCACCGCGTG ACTGTTGACG CTAGCCACAT GTACGCGTTG
ACGGACGTCC AGAATGGTAA CGTGGCTGTA TGTGTCCTCA TAAACCTCGG GAAGCTCGAG
GAGATAGAGG AGGCGGGAGT AGCGGCTAGG CACAGTGTCG ACGCCAACGG CTACATAAGG
CAGTACTACG CTAGGCTCAT ATACGCGCCG AGCCTGATCG ACTCGTTAAC GTTTAGGCCA
AGAGTTAACG TGGAGCTCGT TAAGAGTACT GGTCTGCCGA GCGAGGTAGA GCCCGTGCAC
GTCTATTACA GCTTGCAGGC TAATACTTGG TACAAGCTTG AGATGAGGCT GTACGGTGGG
CACATAACAG TGTACGTGGA CGACTCTAAG GTTATCGACT GGACCGACTC AAGCCCGATA
ACCTCCGGCT CCAGGCTAGG CCTCTTCAGC GCGTACAACA AGAACGTCGA CCACCTATAT
GACAACTTCT ACGTCCGCAA CTACGTAGAG CCAGAGCCAA GCCACGGGCA GTGGCTCCCG
GAGGAGACGG ATCCTTAA
|
|---|
| Protein sequence | MRKTVLALSI AMLALAGAYA AVTIINLTEW HVQATQPPVK KLAAYGVKRT AAYAQAENGL
NVTYVEVTAP LGCRVIFDPA LVLSASTNLP AKLYAESVTG NYAFQLSVNV SLGGTQQVQV
VSGSITQSAG APVSVQGSAN FRLEVLVGSG APLGSEVARL YTWLYFNAST SKARQKIVWV
FKTMSWLYCG WLYRKGHDIV GSTAGAVSGY QVRLRVCSGS GTDSGDTVYL NGKGRADFGD
LRFSYLQPDG REVAIPYWVE SVSGGCATVW VKVPSIPASP GTARIYVYYG NPSATSESNG
AATFIYFNDF SSAIGFTSFP YDKGADGWGD VDGSDSSGWQ LFQGALKHRV TVDASHMYAL
TDVQNGNVAV CVLINLGKLE EIEEAGVAAR HSVDANGYIR QYYARLIYAP SLIDSLTFRP
RVNVELVKST GLPSEVEPVH VYYSLQANTW YKLEMRLYGG HITVYVDDSK VIDWTDSSPI
TSGSRLGLFS AYNKNVDHLY DNFYVRNYVE PEPSHGQWLP EETDP
|
|---|
| |