| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1505 |
|---|
| Symbol | |
|---|
| ID | 4601206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1453078 |
|---|
| End bp | 1454268 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639774280 |
|---|
| Product | cytochrome bd-type quinol oxidase subunit 1-like |
|---|
| Protein accession | YP_920905 |
|---|
| Protein GI | 119720410 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00635225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CCGTGCTCTT CATGGCGCTG GTATTCGGGG TACACATCGT TGCAGTGAAT
ATAGGGATAG CGCTCTCGAC GATAGTGCCG CTCCTCGTCA AGAGGTCTAG GGCGCTCGGT
GACAAGGGGC TAGAAGGCGT GGCGCGCTCC TTGTTCAAAG TGTACGCGGC TACGTACGGG
CTGGCGGGAG TCATGGGTAC GGCGTTCACA GTTTTCCTGG CGAGCTTCTA CCCAGAATTC
GTCGGCGTAG CCGGGAACCT GACGATGGTA CCATTCGGCA TATCGATTGT ATCCATTATG
CTCCACTTCT TCGCCATAGT CGCGTTCTGG TACGGCTGGG ACAGGTTCAG CCCGAAGGTC
CACGAGGCCG TAGGCTGGCT ACTAGCGGCC ACAGCGTACA CGATACCGCT AGGCTTCAGG
GCTGTCTTCG CTTTTCTCAA CACGCCCGCG GGGCTCGTTC TCGGGGAGAA GCCGAGCCTC
AACGTAGTTC AGGCGCTTCT CAACCCGACG TTCCCGCCGC TCTACCTTAA AAGCGTGGTA
GGCGCCCTCG TTGCTGGCTT CCTCTTCGTA GCGGCGGTAC TGGCGTTCAA GGGGCTTAGG
ACAGCCTTGA CGGACGCTGA GAGGGGGTTG TACGTCTTCA GCCTCCGCTA CGCCTCGATG
CTTCTCTTCG CGATGATGTT CCTAGGCGCC TGGTACGCAG TCTCCCTAGT GAACGTCCCT
GTGAAGTTCA ACAATATCTT CGCCCCGCTG GGCGCCTCGC TACCAGCACC TACAACGTCT
AACTACGCCT GGCTCTTCCT CGTGAAGATG GTTCTCGTAG CTGTGCAGGG CGCCGCACTG
CTACTGGTGC TGCTCCCGCG CGGCAAGGGA GAAAGCCTCC TAGAATCCCC GGCGGGCTAC
AAGGCAACCA TAACCGCGGC AGTAGCGGCT GCCCTAACCG TGCTTACAGG GGAATACCTC
AACGCCTTCA GCCAGTACCC GTTCTTCGTA GCTAACGCTC CCCTTATAGC CGACAAGCTC
CCGGAACCCT ACAGGACCAT CCTCACGCGA GCGTTAAACC TTGAAAATGT CAGCCCACTA
GCCCAGGATC CGGCGCTCTA CGCGGCAACA GTGCTGGGCG TGCTCGTGCT CTTCGCGGCA
GCCGGGTACA TGATCTACGT GGTCTTCTTC AAGAAGGGAG GCGAGGAGTA A
|
|---|
| Protein sequence | MNAPVLFMAL VFGVHIVAVN IGIALSTIVP LLVKRSRALG DKGLEGVARS LFKVYAATYG
LAGVMGTAFT VFLASFYPEF VGVAGNLTMV PFGISIVSIM LHFFAIVAFW YGWDRFSPKV
HEAVGWLLAA TAYTIPLGFR AVFAFLNTPA GLVLGEKPSL NVVQALLNPT FPPLYLKSVV
GALVAGFLFV AAVLAFKGLR TALTDAERGL YVFSLRYASM LLFAMMFLGA WYAVSLVNVP
VKFNNIFAPL GASLPAPTTS NYAWLFLVKM VLVAVQGAAL LLVLLPRGKG ESLLESPAGY
KATITAAVAA ALTVLTGEYL NAFSQYPFFV ANAPLIADKL PEPYRTILTR ALNLENVSPL
AQDPALYAAT VLGVLVLFAA AGYMIYVVFF KKGGEE
|
|---|
| |