Gene Tpen_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1493 
Symbol 
ID4601402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp1443326 
End bp1444012 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID639774268 
Productmetal-dependent hydrolase 
Protein accessionYP_920893 
Protein GI119720398 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.264611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAGGC TCAGGTACCT TGGGCACGCG GCCTTCGACG TCGAGCTCGA GGGGTTCGAC 
GGGAGGAAGA GGAGGATCCT GCTTGACCCC TGGCTCGAGA ACCCCCTCAG CCCGGTGAAG 
CCCTCCGACT ATAGGGGAGC GAGGGTCGAC TACATCTTCG TGACGCACGA CCACGGAGAC 
CACCTGGGCA ACGCGGTGGA GCTAGCAAGG GCTACGGGCG CCAAGGTTGT AGCGGTGTAC 
GAGCTGGCGG AGGAGCTGTC CAAGGAGGGC GTCCAGGCTG TCGGCGCCAA CATAGGCGGG 
CCCCTGGCGC TGGAGGGCAT CCAGGCTGTC TTCACGCCCG CTCTCCACAG CTCTTCGAAG 
GGCGCACCGA CGGGCGTCGT TGTGCGCGGC AGGGATACCG CGGTGTACCA CGCCGGGGAC 
ACGGGGCTCT TCGGGGACAT GCGGCTGATC GGGGAGCTCT ACGCGCCCGA CGTAGCGCTT 
CTACCGATAG GCGGGCACTT CACGATGGGC GTAGTTGAGG CGCTGAAAGC CGTCGAGTTG 
CTAAGACCGA GGCTGGCGAT ACCGATGCAC TACAACACCT TCCCCGAGAT AAGGGCAGAC 
CCCGAAAAGT TCAAGGAGCT AGTCGAGGCG ACAACGCGCA CCAAGGTCGT AGTCCTAAAG 
CCTGGAGACT ACGTGGAGTA CCCGTAA
 
Protein sequence
MARLRYLGHA AFDVELEGFD GRKRRILLDP WLENPLSPVK PSDYRGARVD YIFVTHDHGD 
HLGNAVELAR ATGAKVVAVY ELAEELSKEG VQAVGANIGG PLALEGIQAV FTPALHSSSK 
GAPTGVVVRG RDTAVYHAGD TGLFGDMRLI GELYAPDVAL LPIGGHFTMG VVEALKAVEL 
LRPRLAIPMH YNTFPEIRAD PEKFKELVEA TTRTKVVVLK PGDYVEYP