Gene Tpen_1492 details

Gene Information

• Locus tag: Tpen_1492
• ID: 4601401
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1442592
• End bp: 1443239
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639774267
• Product: hypothetical protein
• Protein accession: YP_920892
• Protein GI: 119720397
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0668] Small-conductance mechanosensitive channel

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.281549
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGTCGG ATCACGTTAT TGAAGCCTAC TGGAAGGTTT TAGCTGTGAG TAGCGTAGCT 
ACCAACGTGA GGAAGAGTCT CCAAAAGCTA GCTTTGTGGA TCGTTACCTA CGTGGTTGTA 
ACTGCAACTG TGTTCACCGC TGTACCGTAC TTCTTCCCCC TAGCTAAGCC CGTCATAGAC 
GCCTACGCTA CCTACATATC GATAGGACTC AGCCTGTTCT TCGGCTACAT GATAATCAGG 
GCCTTCGCGG ACACTGTTTA CTGGACGCTC CGCGCGAAGT ACCCCCACCC AACCGCGGCC 
GCTGTTAGGA GCCTCTTCAC CATACTGGGT ATAGGCGCGC TACTGGCCGG CATAGCCGGC 
GGGACAGCGG GTGGGGCGGC AGGCGTCGCT CTCGGAGGCT TCATCGGGAT GGTGGTAGGA 
TTCGCCTCGC AGCAAGTCCT GGGGCAGGCC CTCGCCGGCC TCTTCACGCT GATAGTAAGG 
CCCATAAGGA TAGGCGACAG GGTTAACGTG GCCGGGGAGG AGGGAGTAGT CGAGGACATA 
TCCACCCTCT TCACGGTTAT AAGGAAGAGC GACGGGAGCC TCGCGCTCAT CCCCAATAAC 
ATGGTTATAG GGTCGAAGAT CTACGTGCTC CAAAGGGCGG AGGCCTAG 

 

Protein sequence

MVSDHVIEAY WKVLAVSSVA TNVRKSLQKL ALWIVTYVVV TATVFTAVPY FFPLAKPVID 
AYATYISIGL SLFFGYMIIR AFADTVYWTL RAKYPHPTAA AVRSLFTILG IGALLAGIAG 
GTAGGAAGVA LGGFIGMVVG FASQQVLGQA LAGLFTLIVR PIRIGDRVNV AGEEGVVEDI 
STLFTVIRKS DGSLALIPNN MVIGSKIYVL QRAEA