Gene Tpen_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1488 
Symbol 
ID4601283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1439028 
End bp1439996 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID639774263 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_920888 
Protein GI119720393 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.11548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGGCA AGGAGCTGAG GCGCAGAGTG TTGGAGGTAC TGGCTAGGAG GGGTGGCTAC 
GTGAGGGGCG GCGAGCTCGC GGAGAAGCTG GGAGTATCCA AGGTAGCCAT TCACAGGGCG
ATCGTAGGCC TGAGGAAGAT GGGCTACGTC GTGGAGTCGC ACCCGCGCAG GGGCTACAGG
CTCGTCTCCT CCGACAACCT CGCAGACGCG AACGCCGTCG TCGCAGGTGC CGGGAGGACC
CTCAGGTACA CCGCGTACTA CGTCAAGACG TGCGGGTCCA CGCAGGACGT TGCCGACGCG
CTGGCATCCC AGGGGGCGGA GGAGGGGACG GTGGTCGTCG CGGAGTCCAT GACTAGCGGC
AGGGGGCGCC TCGGGAGGAG GTGGTTCGCC GGCCCCGGGG GCCTCTGGTT CACGGTGATC
CTGCGCCCCC AGCAAATGAA GCACCTCCAG CTACTCTCCC TAGCCGCGGG GCTCTCCGTA
GCCAAGTCTG TGAGGGGGCT TTACGGGATA GACGCTAGGC TCAAGTGGCC CAACGACGTG
GTCGTAGGCG AGAGGAAGCT CTGCGGCATC CTGGTGGAGG GCAAGGCGGA GGCGGACGCG
CTGAAGTACC TCCTGCTAGG CGTGGGTGTG AACGTGAACA ACGAGGTCCC GGAGGGGCTG
GAGGGCGTGG CTACGAGCAT CAAGGAGATA CTGGGGCACC CCGTGCCGAG GCTCCCCCTG
CTCAAGGCGA TACTCGCGGG GCTAGACGGG TACTACGCGG CGCTCAAGCG GGGGGAGCCC
GGCAGGGTGG TAGAGGAGTG GAAGACGCTC TCCTCAACGC TCGGGAGGCG CGTAAGGGTA
TCGATCGTGG GCGGCGGCGT GGTGGAGGGG GTAGCCGTGG ACGTTACGAG CAGGGGGGAG
CTCGTCGTGC AGAAAGACAC GGGGGGAAGG GTCACCGTAG ACGCCGGCGA CGTGGAGCAC
CTGAGGTGA
 
Protein sequence
MDGKELRRRV LEVLARRGGY VRGGELAEKL GVSKVAIHRA IVGLRKMGYV VESHPRRGYR 
LVSSDNLADA NAVVAGAGRT LRYTAYYVKT CGSTQDVADA LASQGAEEGT VVVAESMTSG
RGRLGRRWFA GPGGLWFTVI LRPQQMKHLQ LLSLAAGLSV AKSVRGLYGI DARLKWPNDV
VVGERKLCGI LVEGKAEADA LKYLLLGVGV NVNNEVPEGL EGVATSIKEI LGHPVPRLPL
LKAILAGLDG YYAALKRGEP GRVVEEWKTL SSTLGRRVRV SIVGGGVVEG VAVDVTSRGE
LVVQKDTGGR VTVDAGDVEH LR