| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1486 |
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| Symbol | |
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| ID | 4601281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1436294 |
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| End bp | 1437370 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639774261 |
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| Product | ABC transporter related |
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| Protein accession | YP_920886 |
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| Protein GI | 119720391 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00353537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCTCCG TTAAAGTCGA AGACGTGTGG ATGACTTTTG GGAAGGTTGA AGCCCTTAGA
GGAGTTAACC TGGAGGTCGC GGAGGGAGAA CTCGTAACCC TGCTCGGCCC CAGCGGTTGT
GGTAAGACGA CGTTGCTGAG AGTCATAAGT GGGCTTTACC GGCCTACGCG TGGAAGAGTG
TACTTCGACT CGGAGGACGT TACGGAGAAG AACCCTTGGG AGAGGAACGT TGGGCTAGTC
TTCCAAGACT ACGCGCTGTG GCCTCACTTG AAGGTCTACG ACAACATTGC CTACGGACTA
CGCTTAAGGA AGATCCCCAA GGACGAGATA GACGAGCGCG TCCATAGGGT CGCGTCTCTG
CTGGGCATTG AGGATCTACT GGACCGCTAC CCGCACCAGC TGAGCGGCGG GCAACAGCAA
CGCGTAGCGC TCGCGCGGGC TGTCGTCATA AACCCCAGCG TGTTGCTCTT GGACGAGCCG
CTGAGCAACC TCGACGCCAA GATCAGGATT AACGTCAGGA CGGAGATCAG GAAGCTTCAG
AAAGAGCTCA AGATCACGTC TATCTACGTT ACCCACGACC AGGAAGAGGC CCTCGTCATA
TCCGACAGGA TAGCGGTTAT GAACAAAGGT TTCATAGAGC AGGTAGGGTC GCCCCTAGAC
ATCTACTATA GGCCTAGAAC GCTCTTTGTG GCGGACTTCG TTGGGCAGGT AAACATCGTG
AAAGGAAAGG TTGCCGAGGT AGCCCCGGAC ACCGGGGAGC TCGTCGTAGA GTCGGAAATC
GGGGAGCTAC ACGTCTCTGC GGACGAGAAG GCTTCGAAGG GAGAAGAGGT TTACCTCGCG
TTCAGACCCG AGAACGTGGA GATACTCAGA GCGCCGCGCG GCGGGAGCGC GGGGCTCCTA
GAGGGGAGAG TGGACTCGGT GCAGTTCCTC GGGAGCCTGT TGAGGGTAGA CGTGGAGGTA
GGAGGGAAGA GGATCAGGGC AGAGATACAC AACCCCGCCC GCGCCGGGCT CTTCAGCCCC
GGAGAGAAGG TGTACCTAAG AGTGGACCCC GGGAATATCA GGGTTCTCAA GGGGTAG
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| Protein sequence | MVSVKVEDVW MTFGKVEALR GVNLEVAEGE LVTLLGPSGC GKTTLLRVIS GLYRPTRGRV
YFDSEDVTEK NPWERNVGLV FQDYALWPHL KVYDNIAYGL RLRKIPKDEI DERVHRVASL
LGIEDLLDRY PHQLSGGQQQ RVALARAVVI NPSVLLLDEP LSNLDAKIRI NVRTEIRKLQ
KELKITSIYV THDQEEALVI SDRIAVMNKG FIEQVGSPLD IYYRPRTLFV ADFVGQVNIV
KGKVAEVAPD TGELVVESEI GELHVSADEK ASKGEEVYLA FRPENVEILR APRGGSAGLL
EGRVDSVQFL GSLLRVDVEV GGKRIRAEIH NPARAGLFSP GEKVYLRVDP GNIRVLKG
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