| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1471 |
|---|
| Symbol | |
|---|
| ID | 4601572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1422243 |
|---|
| End bp | 1423019 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639774246 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_920871 |
|---|
| Protein GI | 119720376 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2014] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.536708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCGGG GCCCCGCTCT TAGTACTGTG GGCGTGGTCG AGGAGATATA CGAGTACGCT
CTCTCCAGGG CTGGCTCGGA GAGGGTTAAG CGCGTAGTTA TCGGTGTGCA CGCGACGCTG
GTAGAGCTCG AGGACGGCAG GGCGGGCGTG GCTTACACGA ACAGGGAGGG CCCCCTCTCC
AGCGTTACCC CGGGGAGGCT GAGGGGCATG AATGTGTCCG ACGCCCTGGG GCTCCTCCTG
TCCCCCAGGG GGCTCGAGGT CAGCGTGGGG CTGGCGGCTG TGAACGCTCT GCTGAACGCC
GCGGGGGAGG GGGTGGTGGA GGCGGACGCG CTGGAACAGG TAGGCGTCGC GCCCGGCGAC
TCCGTAGTCC TGGTGGGCTA CTTCGCGCCG TACGTCGAGG CGCTCAGGGG TAGGGTGAGG
AGGCTCGCCG TCCTGGAGTT CGCGAGCGTA GTGGTCGAGG GCGTCGAGGT GTACCCGTGG
TGGGCCTACG CCGCCGTGCT TAGAGACGCG GACAAGTTGC TGATAACGGG CTCCTCGATA
GTTAACCACA CTATCAACTA CCTGTTAACA GCCCCGACGC GCGCCGAGAA GCACCTCGTA
GGCCCCAGCT CGCCGCTAGC CCCCGAGGTC TTCGGGAGGT ACGGCGTGAA GACTATCAAC
ACGGCTGTCG TCGTGGACCC GGAGTCCTGC GCCACGATAC TGATGGAGGG CGGAGGCTTC
TCGTCGTGCT TCAGGGAGGG TTGCCTGCGG AAGGTTAGCG CCAGGCTAGA CGGGTGA
|
|---|
| Protein sequence | MYRGPALSTV GVVEEIYEYA LSRAGSERVK RVVIGVHATL VELEDGRAGV AYTNREGPLS
SVTPGRLRGM NVSDALGLLL SPRGLEVSVG LAAVNALLNA AGEGVVEADA LEQVGVAPGD
SVVLVGYFAP YVEALRGRVR RLAVLEFASV VVEGVEVYPW WAYAAVLRDA DKLLITGSSI
VNHTINYLLT APTRAEKHLV GPSSPLAPEV FGRYGVKTIN TAVVVDPESC ATILMEGGGF
SSCFREGCLR KVSARLDG
|
|---|
| |