| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1468 |
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| Symbol | |
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| ID | 4601586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1419775 |
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| End bp | 1420431 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639774243 |
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| Product | methionine synthase |
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| Protein accession | YP_920868 |
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| Protein GI | 119720373 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.543896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGGGG ACGTGGGCGA GCTTAGGGAG AAGCTCTTCC AGGCAGTGGT AGAGGGGGAC
GAAGCCGCGG CGGAGGAGTA CACGAGGCGC CTCGTCGAGC GGGGGCTGGG TCCTAGGGAG
ATAGTCTCCG AGGTGCTTGT GCCGGCGATG AGGAGGGTCG GCGAGCTCTA CGAGAAGGGC
GAGTACTTCA TACCGGAGCT CGTGATGTCC GCGGAGGCCT TCAGGAGGTC CATGGAGGTC
CTGAGGCCGC TGATAAGGGG GCAGGGCGAG TCCCCGGCGA GGTGGGTCGC CGTCTTCGGG
ACGGTGAGGG GCGACATACA CGAGCTCGGG AAGAACCTCG CGGCCGCTGT ATTCGAGGCC
GAAGGCTTCC ACGTCGTAGA CCTGGGCGTA GACGTTCCGC CCGAGAAGTT CGCCGAGGCG
GTCGAGAAGT ACAACGCCAG GGTAGTCGGT ATGAGCGCCC TCATGACGAC GACGATGCTG
GAGCAGAGGA ACGTCATCGA GGAGCTGAAG AAGAGGGGGC TCAGGGACAA GGTCATAGTG
ATAGCCGGCG GCGCGCCTGT AACGGAGGAG TGGGTCCGCG AGATAGGCGC CGACGTCTGG
GGTAGAGACG CCTTCGAGGC TGTGAAGATA GTTAAGAGGA TGCTGGGTGA GGGGTAG
|
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| Protein sequence | MAGDVGELRE KLFQAVVEGD EAAAEEYTRR LVERGLGPRE IVSEVLVPAM RRVGELYEKG
EYFIPELVMS AEAFRRSMEV LRPLIRGQGE SPARWVAVFG TVRGDIHELG KNLAAAVFEA
EGFHVVDLGV DVPPEKFAEA VEKYNARVVG MSALMTTTML EQRNVIEELK KRGLRDKVIV
IAGGAPVTEE WVREIGADVW GRDAFEAVKI VKRMLGEG
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