Gene Tpen_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1466 
Symbol 
ID4601584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1417826 
End bp1418260 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content60% 
IMG OID639774241 
ProductUspA domain-containing protein 
Protein accessionYP_920866 
Protein GI119720371 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.838968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCGA GGATACTCGT CGCCTACGAC GGGTCGGAGC ACGCGAGGAA AGCGCTCGAA 
GTAGCCGTAG ACCTAGCCTC CAAGTACGGG GCCAAGCTGT TCGTAGTCGA AGTCGTCGAC
TCGAAGTCCC TCACGTCGAG CCTAAGGGAG GTTCCCTCCC TCGACGTCGG CAGGGTTATA
GCCGAGATAA AGTCGAAGGC TAGCGTAGAC GTCAGGGAGT GCTTAAGGCT TGCGCAGAGC
AGGGGCGTAG ACGCGGAGGG AGACGTGCTG GAAGGGGACC CAGCCTCGGA GATCCTGAGG
TACGCCGAGG AGGTCAAGGC GGACCTGATA GTCACGGGGT CCAGGGGGCT GTCCCTCTGG
AAGCGTATCT TCATCGGAAG CGTTTCCAGC AAGATAGTCT CCGAGTCGAA GGTACCGGTC
CTCGTCGTGA AGTAG
 
Protein sequence
MFARILVAYD GSEHARKALE VAVDLASKYG AKLFVVEVVD SKSLTSSLRE VPSLDVGRVI 
AEIKSKASVD VRECLRLAQS RGVDAEGDVL EGDPASEILR YAEEVKADLI VTGSRGLSLW
KRIFIGSVSS KIVSESKVPV LVVK