Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1447 |
Symbol | |
ID | 4601156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1398494 |
End bp | 1399426 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639774222 |
Product | ABC transporter related |
Protein accession | YP_920847 |
Protein GI | 119720352 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.292722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGCCC TAGTGGCGGA GGACCTGTGG AAGGTATACG GGAGCGGGGA GCGGAGGGTA GAGGCGCTGA GGGGTATAAG CATCGAGGTT CGCGAGGGGG AGGTCGTCGC GTTGCTGGGG CCGAACGGGT CGGGTAAAAG CACGTTCATG GGTATAGCGG CCGGCGTCGT GCGCCCTACT CGCGGCAGGC TACTCGTCTA CGGTGGAGAG CCTTACTCGG ACGCGGGTGT TAGGGGTAGA ATTAGCTACA TGCCCCAGGA CTACGGCCTC TACGCCGAGC TCACGGGCAT CGAGAACTAC GAGTTCTACG CCGCGCTCAT GGAGGTAGAC GCTAAGGAGG CTAAAAGGAG GCTTGAAGAG CTCAGCGGGC TACTAGGGCT CGGCGAGTGG TTCTACAAAA GGAGGGTGTC GACGTACTCT GGCGGGATGA AGCGCAAGGC CAGCCTGGCC CTAGCCCTGG CGTCGAACCC CGACTTACTG TTGCTAGACG AGCCTACCTC CGGGCTAGAC CCGAACGCTA GGAGGGAGGT CTGGGGCGTC GTGGACGGGA TGCGGCGCTC CGGCAAGACT GTAGTCCTAG CGACGCACTT GTTCGAGGAC GCGGAGCGGC TGGCAGACAG GGTCGTGGTC ATGAGGGGCG GTGAGGTCGT GGCGGCAGGT TCCCAGGAGG ATCTCAAGCG AAAGGTTGGC TACAAGTACG CGGTGGACCT AGAGCTAAGG GAGGAGCCGG GGGCGGAGCT CCTAGAGAGA GTCAGGATGC TTGGCTACGA GGCTATACCG GCTGGGGGTT CGAGGGTAAC GGTGCTCGGC AACAGCCCCA ACCTCCTGGA CGAGGTGGAG GCGATCGGGG GCGCTGGCGT CGTGTCCGCG TCGATGAGGC GGGTTAGCCT GGGAGACGTC TACTTCCTCT TGACGGGGGT GAGGCTGGAG TGA
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Protein sequence | MLALVAEDLW KVYGSGERRV EALRGISIEV REGEVVALLG PNGSGKSTFM GIAAGVVRPT RGRLLVYGGE PYSDAGVRGR ISYMPQDYGL YAELTGIENY EFYAALMEVD AKEAKRRLEE LSGLLGLGEW FYKRRVSTYS GGMKRKASLA LALASNPDLL LLDEPTSGLD PNARREVWGV VDGMRRSGKT VVLATHLFED AERLADRVVV MRGGEVVAAG SQEDLKRKVG YKYAVDLELR EEPGAELLER VRMLGYEAIP AGGSRVTVLG NSPNLLDEVE AIGGAGVVSA SMRRVSLGDV YFLLTGVRLE
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