| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1400 |
|---|
| Symbol | |
|---|
| ID | 4600464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1353313 |
|---|
| End bp | 1354317 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639774175 |
|---|
| Product | daunorubicin resistance ABC transporter ATPase subunit |
|---|
| Protein accession | YP_920800 |
|---|
| Protein GI | 119720305 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAG GAGCGGTCGT CGCCAAAAAC CTGGTGAAGG TTTTCCGTAC GCGCGAGGGG
GGAGCGCTCT TTAGGGGTAA GAGGAGGGAA GTCGTCGCGC TCCAGGGAGT AAGCTTCGAG
ATACGTCCCG GCGAGATATT CGGGCTCCTG GGGCCTAACG GCGCGGGGAA GACCACGACT
ATAAAGATTC TCAGCACGTT GTTGCTTCCC GACTCCGGCG AGGCATGGGT GAACGGGTAC
AGCGTGCTCG AAGAGCCGCG CAAGGTCCGC GAGAGCATAG GGGTGAGCCT GTACAGCGAC
AGGGGCTTTT ACTGGAAGCT TACAGGGAGG GAAAACCTCG AGTACTTCGC ACGCCTGTAC
CACTTGGAGA GGGGCTACGC CAGGAGGAGG ATAGAGGAGC TTCTAAAGCT ACTGGATCTA
GAAAAGGACG CAGATAGGCT TGTCGAGGAG TACAGCACCG GCATGAAGTC CAAGCTGAAC
ATAGCTAGGG CTCTGCTCCA CGACCCCCCG GTCCTCTTCC TCGACGAGCC GACGATAGGG
CTGGACCCTA ACTCGGCGAG GAAAGTCCGG GAAGTTGTGC TGGAGCTCAA AAAGAGTGGG
AAAACAATAC TGCTCACAAC GCACAACATG TTCGAGGCGG ATATGCTAGC TGACCGCGTC
GCTATAATAA ACAAGGGCAG GATAATAGCG GTGGGGTCTC CGAGAGAGCT TAAATCGAGA
ATCTCGGGGA AACAAGTCGT AGAGGTGGAG GTCGCGGGAA GACCCGAGGA GGTCCGAGAG
AAGGTGAAAA GCGTTCAAGG CGTGCTCGCC ACGTCTCTCT CCGCTGGAAG CGGTAACCCC
TACGCCGGGA CGCTGAGGGT AGTGTACGAG GGGGACGGCG TTCTGCGAGA AGTGCTCTCC
GCGGTGCTAG ACAGCGGAGC CAAGCTGTTG AGCGTGAGAA CAGTCGAGCC CACGCTGGAG
GACGTGTTCG CGTTTTACAC GGGTGGGGGG CTTGAAGAAA ACTAG
|
|---|
| Protein sequence | MSGGAVVAKN LVKVFRTREG GALFRGKRRE VVALQGVSFE IRPGEIFGLL GPNGAGKTTT
IKILSTLLLP DSGEAWVNGY SVLEEPRKVR ESIGVSLYSD RGFYWKLTGR ENLEYFARLY
HLERGYARRR IEELLKLLDL EKDADRLVEE YSTGMKSKLN IARALLHDPP VLFLDEPTIG
LDPNSARKVR EVVLELKKSG KTILLTTHNM FEADMLADRV AIINKGRIIA VGSPRELKSR
ISGKQVVEVE VAGRPEEVRE KVKSVQGVLA TSLSAGSGNP YAGTLRVVYE GDGVLREVLS
AVLDSGAKLL SVRTVEPTLE DVFAFYTGGG LEEN
|
|---|
| |