Gene Tpen_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1396 
Symbol 
ID4600460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp1350649 
End bp1351101 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content61% 
IMG OID639774171 
ProductHEPN domain-containing protein 
Protein accessionYP_920796 
Protein GI119720301 
COG category[S] Function unknown 
COG ID[COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATAACC TGGAGCTCGC TAGGTCCCAC ATAAACCAGG CCCTGGAAAT CGTGAGGCAA 
GCGACCGAGG CTCTGGAAGG CGGCAACTAC CCCTACGTTG TTAGGCAGTG CCAGGAGACC 
GTAGAGCTAC TACTCAAGGC GGCGCTTAGA ATCGTGGGCA TCGAGCCGCC TAAATGGCAC 
GACGTCGGCC CCGTGCTTAG AAGGGAGAGG GCAAGGTTCC CGGCGTGGTT CCAGGAGAGG 
GTAGACGAGC TCGCGTCGAT CTCGAGGAGC CTTAGGAAGG AGAGGGAAGC GGCCATGTAC 
GGGGACGAGG AGAGCGGCTT ACCCCCGGAG GAGCTGTATA CGAGGATGGA CGCCGAGAAA 
GCCCTCAGAG ACGCAAAGAT AACCTTGGAG CTCGTCAGGC AGCTTTACGA AGAAGCTGCG 
AGGCTTTCGC GGGGCGCGGG CGGGGAGGCT TAG
 
Protein sequence
MNNLELARSH INQALEIVRQ ATEALEGGNY PYVVRQCQET VELLLKAALR IVGIEPPKWH 
DVGPVLRRER ARFPAWFQER VDELASISRS LRKEREAAMY GDEESGLPPE ELYTRMDAEK 
ALRDAKITLE LVRQLYEEAA RLSRGAGGEA