Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1391 |
Symbol | |
ID | 4600674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1345078 |
End bp | 1345965 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639774166 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_920791 |
Protein GI | 119720296 |
COG category | [R] General function prediction only |
COG ID | [COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00324967 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGAC CATCACTCAT AGGAGTGGAG GTAACGGTCC TCGTGGACGA CTACGCGGGC TTCTCGAGGC TCCTCGCCGA GCACGGGTTC AGCGTATACC TCTCGCTAAG CTACGACGAC GGGTCGAAGT ACAGGGTTCT ATTCGACACT GGCCGGAGCG GTAGGGTCCT CCTCGAGAAC GCCTCCTCTC TCCGCTTAAG CCTCGAAGAA GTGGACGCGG TGGTCTTGTC GCACAGGCAC TACGACCACG CGGGCGGGTT GCCTGCCCTG CTCGAGAAGG CAGGCTTCAA GCCCGTGGTA GCCCACCCGG ACGTCGTGAA GCCTAGCTAC GCGGACTCCG GGGGCTTCAA GAGGTTCTCC GTCGCCCTCC CGGCGAAGGC GTGGGAGGAG GTGGCCGGGG GCTCGGAGCT CGTACTGACG AGGGCACCCC TAGAGCTCGC GCCGGGGGCG TGGTTCCTCG GGGAGGTCGA GAGGATCTAC GACAACTCGT ACGCGGTTAA AGGGTTCTAC ACGCTGAGCG GCGGGGAGGT CGTGGAGGAC AAGCTACTAG ACGACACGGG GCTCGCGGTG AGAGTCGGGG ATAAGGCTCT ACTCGTGGCT GGCTGTAGCC ACTCGGGGAT CTCCAACCTG GTGCGCAAAG CGTTGCTAGT CACCGGTGCG CGCACGGTAA CCGTTATCGG CGGGCTCCAC CTGGCGGGCG CCACAGCGGA GGAAGTCGAG AGGGTAGTCT CGGAGCTATC CTCGCTGGGC GTAGAGGAGA TACACGCCGG GCACTGCACG GGGCTACGCG GCGAGGCCGC GCTACTCAAG GCTTTCGGCG GGCGCGCCCA CAGGATACAC TCCGGCTACA GGCTCGCGCT CCCCGGGAAA GCCGAGCCGC GAGAGTAG
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Protein sequence | MPRPSLIGVE VTVLVDDYAG FSRLLAEHGF SVYLSLSYDD GSKYRVLFDT GRSGRVLLEN ASSLRLSLEE VDAVVLSHRH YDHAGGLPAL LEKAGFKPVV AHPDVVKPSY ADSGGFKRFS VALPAKAWEE VAGGSELVLT RAPLELAPGA WFLGEVERIY DNSYAVKGFY TLSGGEVVED KLLDDTGLAV RVGDKALLVA GCSHSGISNL VRKALLVTGA RTVTVIGGLH LAGATAEEVE RVVSELSSLG VEEIHAGHCT GLRGEAALLK AFGGRAHRIH SGYRLALPGK AEPRE
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