| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1380 |
|---|
| Symbol | |
|---|
| ID | 4600368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1334460 |
|---|
| End bp | 1335200 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639774155 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_920780 |
|---|
| Protein GI | 119720285 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.282947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGGG AGGTCGAGGA AAGCTCGTAT ATCGTGGCTA AGCTTCTCAA CTGCCTGAAA
GAGGTCTACA CGTTCAAGGA GCTGGAGGAG GCCCTCGGGG TCTCCTCCCA GATACTCTGG
CGCTACACGA CTTTCACGCA GTTCCCCGAG AGGCAGACGG CGAGGAAGAT ACTGGACGGG
ATACGGGAGA AGAGGCTCCT CGAGAGGGCG TTCAAGGAGA TGGTTATCGG GGAGAGGAAG
ACCGTCGAGG AGTGGCGCTT CCTCTTCAAC CCGCGCTTCC TGAACCTCGT CGGCTACCTG
GCTTGGAAGA AGTTCAGGGA CGACGGCGTC GACGTCGTGC TAGCCGCCGG CGAGAAGAAC
GCCGCCCTAG CCGCCATACT CGCCGAGTGG CTCTCGGCGG AATCCTACGT CGCAAGCGAG
CACGCCTGGT CTAGCTGGGG AAAGCTGTAC TCGGCTTCCT ACAGCTCGTC CGAGAGGGAG
GAGATAGTCT ACCTCCACGT GCCCAGGGAG GCCTTGAAGA GGGACTCGAA GGTCCTGTTC
GCCAAGGGCG TCGCGAGGAA CTTCGAATCC CTAGCCGCCC TGCGAAGCAT AGCCGAGCAG
GCCAAGGCTG TGCCTGTAGG AGCAGTCGTA GCCGTGTCGC TCTCGGGCGA GTGGATGGGG
CTAGCCGAGA AGGCGGGGCT AAGGAAGGTC TACGTAGCCT CGGTAGTCGC CGACGGAAAC
GTATTCGTGA ACTTGCCTTA G
|
|---|
| Protein sequence | MAGEVEESSY IVAKLLNCLK EVYTFKELEE ALGVSSQILW RYTTFTQFPE RQTARKILDG
IREKRLLERA FKEMVIGERK TVEEWRFLFN PRFLNLVGYL AWKKFRDDGV DVVLAAGEKN
AALAAILAEW LSAESYVASE HAWSSWGKLY SASYSSSERE EIVYLHVPRE ALKRDSKVLF
AKGVARNFES LAALRSIAEQ AKAVPVGAVV AVSLSGEWMG LAEKAGLRKV YVASVVADGN
VFVNLP
|
|---|
| |