Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1375 |
Symbol | |
ID | 4600363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1330438 |
End bp | 1331823 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639774150 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_920775 |
Protein GI | 119720280 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.575431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTACGACG TTGTAATAGT TGGGAGCGGG ATAGTCGGGT TGATGACCGC GTACAGGCTG TCCCGCTACA AGCTCAGAGT CCTAGTCGTC GACTCGAACC CAGAGCCCGG CTGGGGCGTC TCGAAGGGGC ACGCCGCCAT AGTACACGTG GTGCAACTCC CCTTCAGCTC CCTCAAGAGC AGGATGGCCA GGGAGGGCAA CAGGCTCCTC GGGGAGGTAG CCAGGGAGCT CGGCGTGAGG CTCGAGAGGA CGAGCACGCT GGTAGTGGCG ACGAAGCTCC ACCACTTACT CGCGTTGCCG CTCGTAGCCC TCTACCTGAG GCTCAACCTG GGGAAGGAGT TCCCCGTCAA GCTGAGGGGT AGGGGCTACC TGAGGCGCGA GGAGCCCGGG CTTACCAGGA AGGCTCTCGG GGCGGTGGAG GTCTACGGCT ACGGGTGTGT CGACAACTTC GACCTTCTCT ACGGGCTCTA CGAGTTCGCG TCTGCTAACG GCGTTGAGTT CAGGTTCGGC GAAAGGGTTG TCGCCGCGAG GGTTTTGGAG GACCGCGTCG AAGTCGAGAC CGACAAGGGG AACGTCTACG AGGCAGGCTT CCTGGTGAAC GCCGCCGGCC TCTGGGCGGA CGAGGTGGCG AGGTTTACGG GCGACGAGGC GAGCTTCGAG CTCGGGAAGG GCGTGCTGCT CGTATTCGAC AGGAGGCACA CCAGGAGGTT CGTGGCCCCC GCGTACCTGA AGCCCGACCC CAAGACGAAG GGCGGCGCCG TGATGTTCAC TGTGGACGGG AGGGGGCTCT GGGGGCCGAA CCTCAGGCCC GCCAGGGACA AGTACGACGT GTGCGTAGAC GAGGAGGACG TAGAGATGCT GTACAGGAAG TTCGCACCCC TGCTGGAGGG GGACCCCGGG ATCCCGCTGA AGGCATACGC CGGTGTACGC CCGATACCGC CCGAGAACGA CTTCAGGATA ACGTACTCGA AGAGCAGCCG GAGGGTTGTC CACGCCATCG GGACCGAGTC GCCCGCCTTT ACCGCCTCTC CGGCGATAGC CGACAGGATA GTCTCCATGC TCGGAGACGC CGGGCTCAGG CTCGAGCCTA AGGAGAAGCT GGCGCCGAGG AAGCCCTTCC CCCGCGCGAG GGACAACCCT GAGAAGGCGA GGGGTAGGGT CGTCTGCACG TGTTCGCTGG TAACAGAGGA GGAGGTGAGA GAGGCTGTGA GGAGGGGTTC GAGGACGCTC CAGGGAGTCA TGTTCAGGAC CGGGGCCTGC ATGGGGACGT GCCAGGGGGC GAGGTGCATA GCGGAGGTAG CGCGCATAGT AGCCGAGGAG CTGGGGGTGG GCGTGGAGGA GCTTACCCTC AGGGGTGGTG GGTCTTGGCT CGTGAAGAAA AAGTAG
|
Protein sequence | MYDVVIVGSG IVGLMTAYRL SRYKLRVLVV DSNPEPGWGV SKGHAAIVHV VQLPFSSLKS RMAREGNRLL GEVARELGVR LERTSTLVVA TKLHHLLALP LVALYLRLNL GKEFPVKLRG RGYLRREEPG LTRKALGAVE VYGYGCVDNF DLLYGLYEFA SANGVEFRFG ERVVAARVLE DRVEVETDKG NVYEAGFLVN AAGLWADEVA RFTGDEASFE LGKGVLLVFD RRHTRRFVAP AYLKPDPKTK GGAVMFTVDG RGLWGPNLRP ARDKYDVCVD EEDVEMLYRK FAPLLEGDPG IPLKAYAGVR PIPPENDFRI TYSKSSRRVV HAIGTESPAF TASPAIADRI VSMLGDAGLR LEPKEKLAPR KPFPRARDNP EKARGRVVCT CSLVTEEEVR EAVRRGSRTL QGVMFRTGAC MGTCQGARCI AEVARIVAEE LGVGVEELTL RGGGSWLVKK K
|
| |