Gene Tpen_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1375 
Symbol 
ID4600363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1330438 
End bp1331823 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content64% 
IMG OID639774150 
ProductFAD dependent oxidoreductase 
Protein accessionYP_920775 
Protein GI119720280 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.575431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACGACG TTGTAATAGT TGGGAGCGGG ATAGTCGGGT TGATGACCGC GTACAGGCTG 
TCCCGCTACA AGCTCAGAGT CCTAGTCGTC GACTCGAACC CAGAGCCCGG CTGGGGCGTC
TCGAAGGGGC ACGCCGCCAT AGTACACGTG GTGCAACTCC CCTTCAGCTC CCTCAAGAGC
AGGATGGCCA GGGAGGGCAA CAGGCTCCTC GGGGAGGTAG CCAGGGAGCT CGGCGTGAGG
CTCGAGAGGA CGAGCACGCT GGTAGTGGCG ACGAAGCTCC ACCACTTACT CGCGTTGCCG
CTCGTAGCCC TCTACCTGAG GCTCAACCTG GGGAAGGAGT TCCCCGTCAA GCTGAGGGGT
AGGGGCTACC TGAGGCGCGA GGAGCCCGGG CTTACCAGGA AGGCTCTCGG GGCGGTGGAG
GTCTACGGCT ACGGGTGTGT CGACAACTTC GACCTTCTCT ACGGGCTCTA CGAGTTCGCG
TCTGCTAACG GCGTTGAGTT CAGGTTCGGC GAAAGGGTTG TCGCCGCGAG GGTTTTGGAG
GACCGCGTCG AAGTCGAGAC CGACAAGGGG AACGTCTACG AGGCAGGCTT CCTGGTGAAC
GCCGCCGGCC TCTGGGCGGA CGAGGTGGCG AGGTTTACGG GCGACGAGGC GAGCTTCGAG
CTCGGGAAGG GCGTGCTGCT CGTATTCGAC AGGAGGCACA CCAGGAGGTT CGTGGCCCCC
GCGTACCTGA AGCCCGACCC CAAGACGAAG GGCGGCGCCG TGATGTTCAC TGTGGACGGG
AGGGGGCTCT GGGGGCCGAA CCTCAGGCCC GCCAGGGACA AGTACGACGT GTGCGTAGAC
GAGGAGGACG TAGAGATGCT GTACAGGAAG TTCGCACCCC TGCTGGAGGG GGACCCCGGG
ATCCCGCTGA AGGCATACGC CGGTGTACGC CCGATACCGC CCGAGAACGA CTTCAGGATA
ACGTACTCGA AGAGCAGCCG GAGGGTTGTC CACGCCATCG GGACCGAGTC GCCCGCCTTT
ACCGCCTCTC CGGCGATAGC CGACAGGATA GTCTCCATGC TCGGAGACGC CGGGCTCAGG
CTCGAGCCTA AGGAGAAGCT GGCGCCGAGG AAGCCCTTCC CCCGCGCGAG GGACAACCCT
GAGAAGGCGA GGGGTAGGGT CGTCTGCACG TGTTCGCTGG TAACAGAGGA GGAGGTGAGA
GAGGCTGTGA GGAGGGGTTC GAGGACGCTC CAGGGAGTCA TGTTCAGGAC CGGGGCCTGC
ATGGGGACGT GCCAGGGGGC GAGGTGCATA GCGGAGGTAG CGCGCATAGT AGCCGAGGAG
CTGGGGGTGG GCGTGGAGGA GCTTACCCTC AGGGGTGGTG GGTCTTGGCT CGTGAAGAAA
AAGTAG
 
Protein sequence
MYDVVIVGSG IVGLMTAYRL SRYKLRVLVV DSNPEPGWGV SKGHAAIVHV VQLPFSSLKS 
RMAREGNRLL GEVARELGVR LERTSTLVVA TKLHHLLALP LVALYLRLNL GKEFPVKLRG
RGYLRREEPG LTRKALGAVE VYGYGCVDNF DLLYGLYEFA SANGVEFRFG ERVVAARVLE
DRVEVETDKG NVYEAGFLVN AAGLWADEVA RFTGDEASFE LGKGVLLVFD RRHTRRFVAP
AYLKPDPKTK GGAVMFTVDG RGLWGPNLRP ARDKYDVCVD EEDVEMLYRK FAPLLEGDPG
IPLKAYAGVR PIPPENDFRI TYSKSSRRVV HAIGTESPAF TASPAIADRI VSMLGDAGLR
LEPKEKLAPR KPFPRARDNP EKARGRVVCT CSLVTEEEVR EAVRRGSRTL QGVMFRTGAC
MGTCQGARCI AEVARIVAEE LGVGVEELTL RGGGSWLVKK K