| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1361 |
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| Symbol | |
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| ID | 4602198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1315699 |
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| End bp | 1318458 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639774136 |
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| Product | hypothetical protein |
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| Protein accession | YP_920761 |
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| Protein GI | 119720266 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02578] CRISPR-associated protein, Csm1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.339781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCCAG GCCTGATACT GCTCTACGAG GCCGGGCTAG CGCTTTCGCG CCACGCGAAG
AGAGCGGCGG AGGGCAGGGA GAAGTGGAGG TGCAGGGAGC TCGGAAGCGA GAAGGAGCTC
GCAGACCCGA AGACAGCCGG GGCTAAGCTT GCAGAGTGGT TCGCGAGGAG GGCTGGGCTC
CGCGGAGACC TCCAAGGCAC GGCCGAGGAG GCCCTGAGCC TAATAGAGAG GGTGGACCCG
CTGTCCGCCG GCGCCTTCTC GGGCGTGGAG GAGTACGCGG GGAGAGTGCG GGAAGTCTGG
GCGGGCGTCT CCGACCCCTG GGACGCGCCG CTACTCAGCC CGCTCCGGAT CCTCGAGAAA
ATGGGCTACC GGGAGCTCCT GTCCGGCTCC AGGGCCGAGC TCGACGCGGA GGCTCCGAGG
AGGCTCCTTG GAGACCCGGA GGAGCTGAAG AGGTACGTCG GGGAGGCGAA GGGCAGTAGG
TCGTGGCTCG CGGCGAGACC CCTCCCGCGG GAGTTCACGG AGATCCTCGA AGCCTTGAAG
CTACGCTCCT TCGAGGAGGC AGTCAGAGGA AGCGACTACG GCGAGGTCGC CGAGGCGCTA
CTCTCCATGC TCGGGAGGGC GGCGGAGTTC TACGAGGCTC TCGGCTCGTG CAACGGCGTC
GACGACACGC TTGAAAGCGT GGTTTCGAGC ACCCTAGCGC TCGTGCCCTC GCACCCGCTC
CTGCCCTCCG TGCCCCTGCC GGCTCTGGCG AGGCTGCACG CCGCCCTGGC GTCCGCTGGA
GAAGGGTTCG TCCTCCTAGG CCTGGACGTC AACGGGATAC AGGACTTCGT CTACGCGCCG
GTAAGGGAAA GCGCGGCCTC GAGGGTGCTG AGGGGCAGAA GCCTACTGGT GGAGCTCGTG
CAGTTCACAG CGACCAGGAT CGTGCTCGAG CTCGCCGGGG CGACGTGGTC GGCCCAGCTC
AGCAAGGAGG GCGGAGCCCC CACCTTCGTG CTACCCGGCT CGTTCAGGGA CAAGGTCGAC
GCGCTCAGGG AGATCCTGGG AAGGTGGATG GCCAGGCAGT TCAAGGGCTC GCTGTGGCTC
ACGGTGGCGT GCTCCGACCC CGCGCCGACA GCCAACGCCG CGAATCCTGG AGGCGCGTTC
GTAGCCGTCT CCGAGAGCTA CTCAACCGCC GTGGCCTTCT CGAAGGACTC GCGCTTCTCC
GGGTTCGCGG CGGAGCTCGC GGCCCTCGGG AACGAGGACG TCGAGGACCT CGACTCGCTG
ACCAGGGAGC CCGTCCTAAA GGGCGACGGG CTCAAGCTCA GGGTGGAGCG GAGCACCAGG
GACTACGCGG AGAGCCTAGC ACCCGACAAG CTCTCCGACG GGGACCTGCT CGGAGGGCTC
ACGCACATCA GCCTGGCCTG CGGAAGCGCC GCGAGGAACC TTGCGGCCGT AGTCTCGCTC
TACTTCTTCA AGGGCGGCAG GCCCTGCCGC GAGGCAGCGG AAGCCGTGCT CGGCGCCGTG
TTCAGGGAGC GGGGCAGAAG GCTCTACTTC GTCCTCGAAG GGGACCAGCC CCTCGCCGTC
GCGCTCGCAC CCTTCACGGA GGCGGGGGCG ATCCACGTCC TCGTGGCGCA CACGAGGCGG
GAGCTCGCCA AGGCGGAGGA GAACCTGAAG GCCGCGGAGA CCCTCCTCAG GGTCATGAAG
GGGTACGTGA AAGGGGCTGC GGGGCTCGCC GAGAAGATCC ACGTGGAGGT GAGGGTCGTG
AACGCCCCGC GCGACTTCAT ACCCTCGGCG GGCGTCGCGG AGCACTACAG GGGGTTGCCC
GTGGCCTTCT CATTCGCGCC CTACTACACC AACCCGTACC ACCCGGTGAG GGCCGAGGAG
GAGGCGCGGC CGATAATGGG AGGCGAAAGG CGCGTCGCCG AGAAAGTGCG CTTGCTGGAC
CTGGACGACA TGGGCGTGAT CGCCGTCTCC CTCCTTGACG CAGACAAGAT GGGGGACGTG
TCGAAGTCCC TAGGCGCCTA CCCCGCTATC TTCTCCGCGG TCTCCGACTT CCTCTCAATG
GGGTTCGGCG TAAAGGCGTA CTCGGCCGTC CTAGCAGACG CGAAGAAGAG GGAGGGGGGA
AGGGGGATCC TCCTCTACGC CGCGGGAGAC GACCTAGCGG TCTACGGCGA GTGGCACGAC
GTGCTCAGGA TACTCGACAT CGTGAGGAGG GAGGTCCTCG AAGGGCTCCT CAACCCCCTC
GCCGCGAGCA GCGGGATGGC CGTAGCAGAC AGGAAGGACC CCGTGCTCCA CGTCTACGAC
GCGGCGAGAG CCGCCGAGAG GGAGGCGAAG AGGCGGAGCC AGCCCGGCGG CTCCCTCGCC
GTGAGCGGTA TCTGCAGGAA GCCCATACCA ATGTCGGGCG GCGAGCTGGA CCTCGCGAGG
CTAGCCGCGG TAGTCGGAGC GGCCCTCGGA GAGGAAGCCG GGGAGTTCGA GAGCCTCAAG
CCCCTAGTCT ACGCCCTCGC CGAGCTGGCC CACGAAGCCG AAGAGGCGGA GGAGGCTCTA
GGCAAAAGCC CGCTCAGAGT CGCGAGGGTT GTCGTACACT ACCGCTACCT CGAGGCTAGG
CGCGGAAAGG ACTTCGAGAA GCTCTCCGAG CTCCTCGGCG AGCACGGAGT AAGGCTCCCC
GGGCCCAAGG ACCCGAGCAA CGAAGTCGTG AGAAAGCTGG CAGCCCTCAA GCCGCTCTTC
GACTTCCTAG CCCTCGCCGC GAGAAAGCCT AGAGAGGCTA GCCCGCAACC CAAGGTCTAA
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| Protein sequence | MRPGLILLYE AGLALSRHAK RAAEGREKWR CRELGSEKEL ADPKTAGAKL AEWFARRAGL
RGDLQGTAEE ALSLIERVDP LSAGAFSGVE EYAGRVREVW AGVSDPWDAP LLSPLRILEK
MGYRELLSGS RAELDAEAPR RLLGDPEELK RYVGEAKGSR SWLAARPLPR EFTEILEALK
LRSFEEAVRG SDYGEVAEAL LSMLGRAAEF YEALGSCNGV DDTLESVVSS TLALVPSHPL
LPSVPLPALA RLHAALASAG EGFVLLGLDV NGIQDFVYAP VRESAASRVL RGRSLLVELV
QFTATRIVLE LAGATWSAQL SKEGGAPTFV LPGSFRDKVD ALREILGRWM ARQFKGSLWL
TVACSDPAPT ANAANPGGAF VAVSESYSTA VAFSKDSRFS GFAAELAALG NEDVEDLDSL
TREPVLKGDG LKLRVERSTR DYAESLAPDK LSDGDLLGGL THISLACGSA ARNLAAVVSL
YFFKGGRPCR EAAEAVLGAV FRERGRRLYF VLEGDQPLAV ALAPFTEAGA IHVLVAHTRR
ELAKAEENLK AAETLLRVMK GYVKGAAGLA EKIHVEVRVV NAPRDFIPSA GVAEHYRGLP
VAFSFAPYYT NPYHPVRAEE EARPIMGGER RVAEKVRLLD LDDMGVIAVS LLDADKMGDV
SKSLGAYPAI FSAVSDFLSM GFGVKAYSAV LADAKKREGG RGILLYAAGD DLAVYGEWHD
VLRILDIVRR EVLEGLLNPL AASSGMAVAD RKDPVLHVYD AARAAEREAK RRSQPGGSLA
VSGICRKPIP MSGGELDLAR LAAVVGAALG EEAGEFESLK PLVYALAELA HEAEEAEEAL
GKSPLRVARV VVHYRYLEAR RGKDFEKLSE LLGEHGVRLP GPKDPSNEVV RKLAALKPLF
DFLALAARKP REASPQPKV
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