Gene Tpen_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1358 
Symbol 
ID4602195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp1312213 
End bp1312920 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID639774133 
Producttranscriptional regulator, TrmB 
Protein accessionYP_920758 
Protein GI119720263 
COG category 
COG ID 
TIGRFAM ID[TIGR01884] CRISPR locus-related DNA-binding protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTAG GGGCGCCGAC CGCGAGGTTA TTTAGGGGGC GGGGCGGGGC TATACGCGTG 
ATCGATGCAC TGGTGTTGAC GCTGGGCTTC GAGCCGGGGC CCCTGATAAG CGCTGTTGCC 
TCGGCGGCGT CGGAGGGGCT GGCGGAGGGC GCTAGGGTGG TGGTGCTGAC CGCTGGCTTC 
CCGGACGAGA GGGCTGAGCG CGCGTGGCTG GAGTTCCAGC GCGTAGTCGG CATGATGGGC 
TTGGCGAGGA GGCCGGGCTT CTCCGTGGAG AAGAGGGAGG TCCCGCTCGA CGACTTCGTT 
GCAGCAGTTA TCAACGTGAA GTCCTTGTTC AGGGGGCTCG AGGACAAAAG GGTGAGGATC 
TCGATTACGG GCGGCATGAG GGCGCTGGGC ATCGCGGTTC TGACGGCCTA CTTGCTCACC 
AGGTGGAGGG TTGACCCCGA GGTCGAGGTG TACCTGGAGG GGCAGGGGAG GGCCTTGCGG 
TTGCCGCGCC TCTCGAGGGT GCTGGGGGTA GGCGTCCCCG AGGCCTGGCT CGAGGTGCTC 
TCAGCCCTGG AGAAGAGCGG CCCCTTAGGC GCAAGCGACC TCGGCGGGTT GCTGGGCAAG 
GATAGGAGCA CCGTGTTCAG GTACCTGAAG AGGATGGAGG AAGCGGGGCT CGTGAGGCAA 
GTCGATGGCG GCTACGTCGC GACGGACCTC GGAAGGCTCC TCCTGTGA
 
Protein sequence
MTLGAPTARL FRGRGGAIRV IDALVLTLGF EPGPLISAVA SAASEGLAEG ARVVVLTAGF 
PDERAERAWL EFQRVVGMMG LARRPGFSVE KREVPLDDFV AAVINVKSLF RGLEDKRVRI 
SITGGMRALG IAVLTAYLLT RWRVDPEVEV YLEGQGRALR LPRLSRVLGV GVPEAWLEVL 
SALEKSGPLG ASDLGGLLGK DRSTVFRYLK RMEEAGLVRQ VDGGYVATDL GRLLL