| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1342 |
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| Symbol | |
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| ID | 4600866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1293538 |
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| End bp | 1294374 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639774117 |
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| Product | CRISPR-associated protein APE2256 family |
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| Protein accession | YP_920742 |
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| Protein GI | 119720247 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4006] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | [TIGR02619] putative CRISPR-associated protein, APE2256 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.330295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGTAG TCTCCACGGT GGGTACGAGC ATACTGGGCA ACGTGGAGAC CAAGTGGCTG
GACAGGGTCC CCGAGAAGTA CCGCGGCCTC GTCAAGGGTT CTTCGAGGCT CAGCGTCACG
GACGAGAGGC AGAGGGAGTT CGAGGCGAGG GCCCACCCCG GCGACGAGCT CTTCGACGCC
GTCTACAGGG TCCTGGAGGC TAGCCCCAGG GAGGCTAGCG CCGAGCTTAA CGCTCTGCTA
GGCTTCCTGG AGAGGAGGAA GGGTAGCCTT GCGGGCGCGG ACGTCGAGCT CATGTTCTAC
TCGACCGACA CTGGTACGGG GTACTTCTGC GCCAGGCTCG TCGAGAGGTA CGCGAGGGAG
AGGCTCCGGG GGGCGCTGGG CGGGGCGAGG GTCCAGGTCC AGGAGCCCGT GAAGCTGAAG
AAGTTCGGGT GGGGCTACGA GTACTTCCAC GAGGCCCTCC TCGACATGGT GGACAAGGCG
GCTAGGCTGA TGGCGAACAA GAAGAGGAGC GGGTACAGGG TCTACGTTAA CGCTACGGCT
GGCTTCAAGG TGGAGGCGGC GTACCTGACG CTGGTCTCGC TACTCGTAGG CGCGGACTCC
GTGTTCTACG TGCACGAGGC TACGAGGGAC GTCATCGAGC TACCCGTGCT ACCCCTCGGC
TTGAAGGCGA AATACGCCGA TGCCTTGCGG GAGCTGAGGG AGCCCACCCC CAGGGGCGCC
CTGGAGAGGA GGGGCGTAAG CGTGGAGGAG CTCGAGGAGA AGGGCCTCGT CGAGGTCAGG
GACGGGCTGG TAGTTGCGAG GGAGTGGGTC AGGAAGCTCC TCGAGCTAGT CGAGTAG
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| Protein sequence | MLVVSTVGTS ILGNVETKWL DRVPEKYRGL VKGSSRLSVT DERQREFEAR AHPGDELFDA
VYRVLEASPR EASAELNALL GFLERRKGSL AGADVELMFY STDTGTGYFC ARLVERYARE
RLRGALGGAR VQVQEPVKLK KFGWGYEYFH EALLDMVDKA ARLMANKKRS GYRVYVNATA
GFKVEAAYLT LVSLLVGADS VFYVHEATRD VIELPVLPLG LKAKYADALR ELREPTPRGA
LERRGVSVEE LEEKGLVEVR DGLVVAREWV RKLLELVE
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