| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1334 |
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| Symbol | |
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| ID | 4601309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1287476 |
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| End bp | 1289266 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639774109 |
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| Product | membrane protein-like |
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| Protein accession | YP_920734 |
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| Protein GI | 119720239 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1470] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.513509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTTA AGGCAGGCGG TAAAGAAAGA ACTCTCCTCC ATACACGTTA CGCTCTCCTA
GCGCTGATGA TCATACTGGT TATGACTCCC CGTCTATTAA CCGCGCAAAG CACTAGCGTG
AATGTACATG GAGTAGTCGT TGACCCGAGG GGGGCGCCGA TAAGCGATGT ATCAATACTG
ATCTTCGGCG AGGATAACAC TCTTGTCGCC AGAGTTAAAA CCAGCATGAC GGGTGACTTT
TGGGCTTTAC TGGCTCCAGG CACGTACAAA GCTTCCCTAA TTAAAGTGGG CTACGAGGCT
AAAACCATTT CCTTTAGCAT TTCCGGCGAC AGGCTACACG TAGAGCTGGG AGAGATCACC
CTGGATTACA GCCTCTCAGT CTCCGTAGAG CTCAGAGATG TAAGAGCCAG CTGTCTTTCC
ACGCTCCGCA TACCGGTGGT TTTGGCGGAG AAAGGTTCGA GAGAAGAAAC CGTCACCCTC
TCGGCGAGCG CACCTTCCGG GTGGACCGCT GGCTTCTACC TGGGAGACCT CGAGGTGAAA
AGCATAGTCT TAAGCCCTGG GCAGACCTTG AAGCTTGACC TAGTGCTGAA AGTACCTTAC
AACGCCTCCG GTCGGTACAA CATAACGGTA GACGTTCTTG GATACACTCT TCAGAGGAGA
GTGATCACAG TCGACATCGA GCATAGAGAC CCCCAGCTCG TAACATCTAC CTACCTAAGC
GTAAAGGCGT CTCCCGGCTC AACGGTGAGC CTCGACGGTT TAGAGATAAC GAACAAGCTT
CCCGATAGGA CTTCAGGGGT AGTCTTCCTG CTACTACCGA GCCGGTGGTC AGGGAGTATT
CTCGACTCAA CTAGCGGCAA TAACCTCTAC AAGCTCTCCT TGAACCCCGG AGAAAGCGTG
AAAGCTAAAG TCGTCCTGCA GATCCCCGAT ACCGCGGCAC CGGGTAACTA TACAGTAGGC
GTTGTGTTCA GAGGCGTGGA CCCGTACTTC GAGTCGAAGC TCTGGCTCAA CGTTACCGTC
GTAAAGGGAA AGCCCCTCGC GAAGCTAGAA ACCGAGACTC CTTTCCTCAA CACCTACGCC
GGCCGTAGTG CAAGCTTTCT CGTCACTACT AGGAATATCG GCGAAGGAGA CGGAGTCGTA
GAGCTAGTCG TGAAAGGACT GCCGCCCGGC TACAGCTGGC GTATAGAAGA CCTTAACGGG
AATGTTATCT CCAAGCTGTA CCTGAAGGCG GGAGAAAGCA GGCAATTAAA AGTTGTCGTA
AGCGTACCTC TCCTCGCCGA GCCCTCGGTC ATTCCTTTCA TACTCGAAGC CAACACGAAC
TATTCTCGTG TAAGCCTACC TCTCAACCTG GGAGTTATGG GAAGCTACAG CCTCGAGTAT
ACAACCCAGA ACTTCTACTT GGAGGTGACA TCGGGCTCTT CGGCCACCTT CCAATTAGGG
GTCAAAAACA CCGGCTACAG CTCATTAACA AACGTAAGAA TAGAGGTGTC TAACGTGCCG
AGGGGGCTCC GCGTAAACAT CTCTCCAGAA GTCGTTCTAT CGCTTAAAGC CCAGGAAAAC
GCCAACTTCA CGGTAACAGT TTACGCAGAG CCGGACGTAA GCGCTGGAGA CTACTACATA
ACCTTGAAGC CGCTGGCCGA CCAGCTCAGC GAGGATCAAT CCCTAGTTGC AACGAGGCAA
CTCCACGTAT ACGTAAAGAC GGGGGCCGGC GCGGTATACA TAGGGCTGGG AGCTCTACTC
GCACTAGTAG TGCTTTTAGT CGCGGTCTAC AGAAAGTTCG GCAGGAGGTG A
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| Protein sequence | MTLKAGGKER TLLHTRYALL ALMIILVMTP RLLTAQSTSV NVHGVVVDPR GAPISDVSIL
IFGEDNTLVA RVKTSMTGDF WALLAPGTYK ASLIKVGYEA KTISFSISGD RLHVELGEIT
LDYSLSVSVE LRDVRASCLS TLRIPVVLAE KGSREETVTL SASAPSGWTA GFYLGDLEVK
SIVLSPGQTL KLDLVLKVPY NASGRYNITV DVLGYTLQRR VITVDIEHRD PQLVTSTYLS
VKASPGSTVS LDGLEITNKL PDRTSGVVFL LLPSRWSGSI LDSTSGNNLY KLSLNPGESV
KAKVVLQIPD TAAPGNYTVG VVFRGVDPYF ESKLWLNVTV VKGKPLAKLE TETPFLNTYA
GRSASFLVTT RNIGEGDGVV ELVVKGLPPG YSWRIEDLNG NVISKLYLKA GESRQLKVVV
SVPLLAEPSV IPFILEANTN YSRVSLPLNL GVMGSYSLEY TTQNFYLEVT SGSSATFQLG
VKNTGYSSLT NVRIEVSNVP RGLRVNISPE VVLSLKAQEN ANFTVTVYAE PDVSAGDYYI
TLKPLADQLS EDQSLVATRQ LHVYVKTGAG AVYIGLGALL ALVVLLVAVY RKFGRR
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