Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1333 |
Symbol | |
ID | 4601308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1286524 |
End bp | 1287471 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639774108 |
Product | ABC transporter related |
Protein accession | YP_920733 |
Protein GI | 119720238 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.573564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCTCG CCGTGGAAAC AGATAGGCTG GTCAAAGTTT ATAGGGACAG GGGATCCGAG GTCAAGGCTC TCGACGAGGT TAGCCTCAGA GTGCCGGCTG GAAGCATCTT CGGCATATTC GGGCCCAACG GTTCCGGGAA GACCACGCTT ATATCAATCC TCTTGGGCTT GATTTTACCC ACGAGGGGTA GCGCAAGGGT GCTGGGGTAC GACGTTGTAA AGCAGTCCCT AAGCGTGAGA AAGAGGGTGG GGTTGCTACC CGAGGCCTTC GGCTTGTACG AGCACATGAC CGCGCTTGAT AACCTAGTAT TTTTCGGGCT ACTAGACGAG GTGCCGAAAG GCGAGGTCGA GAAAAGGGCC CGCGAGGTCC TCGAGCTCGT AGGACTGAGC AATAAGGCGG GCGCAAAGGT CTCCACTTTC TCGAGGGGCA TGATACAGAG GCTGGGGCTA GCGCAGGTTC TCATGAAAGA CCCAGACCTC GTAATCCTCG ACGAGCCGAC GATGGGCCTC GATCCAGACG GCATAGAACT CCTAAAGATC CTAGTGCTAG GGCTCAGGGA GAGGGGCAAG ACCATAATGA TATCCACGCA CCTCCTCCAC GAAGTCGGCA ACATCTGCAC GCATGCAGCG ATAATCAGGA AGGGTAAGGT ATTAGCTCAG GGTAGCCTCG AGGAAGTTAC ACGAGAACTC GCAGAAAAGC AGTATTCAGC CTACGCGGTG AGAAGGACGG ATTACTCCGA GAGGCTCCTC GAGGAGCTCC GCTCGCTCCC CGAAGTCATA GTTACGGGGC ACGGCGGGAA CACGATCAGG GTTTTAGCGA AGAACGACCG CGTCTCCGCG CTCATCGAGG TCGCTGAAAA GCACGGAGCC GCCGTAGAAC CCTTAACATA CAGGGAGGTA ACCTGGGAAG ACGTGTACCG CTTCTACCAG GGTGGTGCTA GGTGGTAA
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Protein sequence | MELAVETDRL VKVYRDRGSE VKALDEVSLR VPAGSIFGIF GPNGSGKTTL ISILLGLILP TRGSARVLGY DVVKQSLSVR KRVGLLPEAF GLYEHMTALD NLVFFGLLDE VPKGEVEKRA REVLELVGLS NKAGAKVSTF SRGMIQRLGL AQVLMKDPDL VILDEPTMGL DPDGIELLKI LVLGLRERGK TIMISTHLLH EVGNICTHAA IIRKGKVLAQ GSLEEVTREL AEKQYSAYAV RRTDYSERLL EELRSLPEVI VTGHGGNTIR VLAKNDRVSA LIEVAEKHGA AVEPLTYREV TWEDVYRFYQ GGARW
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