| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1318 |
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| Symbol | |
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| ID | 4601998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1265808 |
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| End bp | 1267571 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639774093 |
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| Product | hypothetical protein |
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| Protein accession | YP_920718 |
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| Protein GI | 119720223 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00353025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGGTGG AGGAGCTCTC AGCCGTCGGC GCGAGGCCGG GGTGCTTCTT CTCGGCGGAC
TTCGTGAACA TCACCCCGTG GTACGGCGGC AGGCACACCC AGGACGCTGT GAGGTGCCTG
GACGAGAGGT GCACGAAAGC CTACTACTCG CTCCCTACGG CCAGGAGCGT GAAGGGGCTG
CTGAGGTGGC TTACCAGAGC GGTGGTAGCG AGCTTCGTCC CCGACGACCA GCTGGCCAGC
CACGGCTACG CCGCGGTCGA GTGCTTCCCG AACTGCGGGT CCAGCAAGCC GGGCCTCGTC
GAGGCGATCT TCGGAACCGT GGAGCACGCG AGGCCCGGGG GGCAACGCGT AGGGTCCAGG
GCGGGCGCCC TCTCGGTCGT CGTGAAGCCG AAGCTGAACT GCCGCTCACC CGTCTACGCC
GAGTACCAGG ACGTGCTAAA GCTGATCAAG AGCATAGCCG GGGGTAAAGG GTGGGGCGTT
TACTCGCAGA AGCCGAGCGC GCTGCTACAG GAGCTCGAGG ACCGGGGCTT CAGGGCGCTG
AGGGGGGAGG CGAGGCCGGA GGACAAGGCG GCGGGGTTCG CCGAGCTGTT CACAGTCCCG
CGCGTACTGC TGAACGCCCA GAGGCTCGGC AAGCTGAGGG GCAAAAGGCA GGAGGAGTTC
GCGAGGAGCC TCTTCGAGGT CCAGCCGCTC AGGGAGGGGT GCGTCTCCAT GCGCGTCGAG
CTCTACCTCG ACGGGGACAT GCTCTCCGGG GCCCTGGAGC CCGCGCGGGG GGAGGAGCTC
GCGGAGAGCG TGAAGCGGCT CGAGGAGCTC CTACTGGTCT ACGGGCTACT GCTCTTCGGA
ATCGGGAAGG CTTCGAGCAG GGGCTTCGGC AGGTTCGCCC CCAAGTCGCC GAGGGGCAAC
GTGCACCCGC TGGTCGAGAA GGCCGCCGCG CGCCTCGAGG AGAGAGACCT CGAGGGCTTC
AGGGAGGAGT GCCTGGGGCT GGCTGAGCGG GCGCTGAGGG CCCTCGGCGT CGAGGCGGAG
GCGAGGAGGA CGGTGGCGAG CGTCCCGAGG ATCTCGAACG CCGAGGTAAC GCTGATCGAG
AGGCCGGCGC ACCCGTACCC GTACGCATCC AGGGAGGCCG CGAGGGTTAA GCCCTCCAAG
AAGCCATGCT CGGGGGACGT GCTGTGCGTG CTGAGCGCCG TAGGCAAGGC CACGCTGAAG
AGCACGTGGA AGGCCTACTG GCAGTCGATC TCCGGGGCTG AATGGGGCGT GACGGGCCCG
GGCTTCCCGT TCCACACGTG GGGGCTGGGC CTGCCGAGAG CCGTGTGCAA GGGAAACTCC
TGCACGGGCT ACGTCGTCGT CGACGCGGAG AGCCTTGGAG GCGCGCAGGG AGACGTGGAC
TACTGCTTGC AACGCCTCAG CTTTAGGAAC GACCTGAAGA GGTGGAAGTC GCCGCTCGTG
CTGTCCCCCG TCCCCGCGGG CAACGGGCTC GGGGTAGCCG TCGTCCTGCT CAAGCGCCTA
GACATCAAGC CGTTCCTGAG CCCCGAGGCG CGGAGAGCCG TCCTCGCCCA CGTCGGTATA
CACCAGGGTA GCAGATACTT GCACGTGATC GACGTTGGGA GGGGCGCGTC GACGACCGGC
TGGACCGAGG ACTGCGGGTC GGACCCCCTC GGCGCCGCCG ACGTCTCTCA GAGGAGGGTC
GTCGCGCTCC CCGGGGACGC GGCGGAGCTC CTCGTGAAAG TCCAGGAGCT CGCGAGGGAC
TGGGTTGTGT ACCTGCTGAG GTGA
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| Protein sequence | MEVEELSAVG ARPGCFFSAD FVNITPWYGG RHTQDAVRCL DERCTKAYYS LPTARSVKGL
LRWLTRAVVA SFVPDDQLAS HGYAAVECFP NCGSSKPGLV EAIFGTVEHA RPGGQRVGSR
AGALSVVVKP KLNCRSPVYA EYQDVLKLIK SIAGGKGWGV YSQKPSALLQ ELEDRGFRAL
RGEARPEDKA AGFAELFTVP RVLLNAQRLG KLRGKRQEEF ARSLFEVQPL REGCVSMRVE
LYLDGDMLSG ALEPARGEEL AESVKRLEEL LLVYGLLLFG IGKASSRGFG RFAPKSPRGN
VHPLVEKAAA RLEERDLEGF REECLGLAER ALRALGVEAE ARRTVASVPR ISNAEVTLIE
RPAHPYPYAS REAARVKPSK KPCSGDVLCV LSAVGKATLK STWKAYWQSI SGAEWGVTGP
GFPFHTWGLG LPRAVCKGNS CTGYVVVDAE SLGGAQGDVD YCLQRLSFRN DLKRWKSPLV
LSPVPAGNGL GVAVVLLKRL DIKPFLSPEA RRAVLAHVGI HQGSRYLHVI DVGRGASTTG
WTEDCGSDPL GAADVSQRRV VALPGDAAEL LVKVQELARD WVVYLLR
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