Gene Tpen_1285 details

Gene Information

• Locus tag: Tpen_1285
• ID: 4600593
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: -
• Start bp: 1225156
• End bp: 1227171
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639774061
• Product: hypothetical protein
• Protein accession: YP_920686
• Protein GI: 119720191

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.328698
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTGGTTT CGCGTTGGTT GTTTAGGGTT GGGCTTGTAG CGGTAGTCCT GCTTCTACTC 
GTAGCTCGAT GCGTGCGCGC CGAGAGGGTT TCGCTGCTTC CTCGCTCGAT AAGCTACTAC 
AGCATTAGGG TTTCCGCGGC GCCGGCGTAC GTCGTGCTCG TGAGTCATCA GCCGTGGCCG 
GCCGTGGCTT ACCTGGCGAC TGCCGAGGAG TGTGAGCATT TCCTCGCGCG CGGGGGTAGT 
GACATCGAGG TTTTGAGGGT GGTTAGCGTG CCAGGCTACG GCGTGGTCTC CTTGAGGATA 
GATAGCCCCG GCTCGTACTA CGTGTTTTTC TACTCGGACG AGAGGCTCTA CGTCTACGTT 
AGGTACTACG GCTTGCCGGC GGGCCTTGCC AGCTACCCGG ACGTCGCGGT GAATACGAGC 
ATGGTTCTCG GCTTCTTCAA CGTAAGCGCA GCCTCCGCTA AGAGCTACAG CAGTAGAGCC 
GCGGAGGCGG ACGCGTGGAG CCTCCAGCTG AACGCCGTCG TAGAGGTTTC CTTGGCGGGC 
GGCAGGAAGC AGTACTACTG GGTTCAAAAC ATGGTCGGCG GCATAGAGGG TACTCGTTCG 
TACGAGAACA AAACGGAGAA GGCTATTATG TACCAGGTTT GGAACAACAT TTGGAACAAT 
ACGGGGCGGC TTAGCCTGCT AAGCGACGAG AGGATATCCG GCTGCGGTGG TGTGTACAGG 
GATAGGGACG AGTACTACTA TGCGTGCGTG TACACCTACA GCCCCTGCGA CCTGCCCCTG 
GCAGGCTTCC TGGTCGTCAG GGCTTACGCG AGTAACGGCG CTGTACACGT CGATTTCGGC 
TACGTCACCG CTCAGAGCGG CGACTACAGG CCCGCGATTA TAACGTGGTA CGACAACGTG 
ACCATAAGGA CTAACCCGCC GGCCGTAGGC GCCGGCATAG TGGCTACGTC GAGCTACCTG 
AACGGGCGTG GGCTCCCGCT GAACGTTGAG CTCGTGTTCT GCGGTTTCTG TTGCTCGGAG 
CACGCTACGT TCAGCGAGCT GGAGGCGAGG CTCACCCTTG CCTACTGGAG GGGCGGCGGC 
TGGGCGCCTT TCCCGAATCT GTACAGCTTT GGCGTGAGCA CAAACGAGAC TGCTACCAAC 
GTGGCTGTGC GGTACGCTGA CGGCTTCGCG GTCGTGGAAA GAGGCGCGCT GAGCCCGGCT 
AAGCTCGCGG AGAGGCCGAG GCTACCGGCC CTGCCGATGA CTAGCGTCAG GTACTGTAGC 
ATGTTGACCG GGGAGTGCTC CGTCAGGTAC GTGTACTCCC CTGTAACGCT CGCCGAGAAG 
GCTAGCGTCG TGTACGACGG CAACCGCACC AGGTACGTGC TTTTAGGGTA CTACGTGGAC 
GGGCGGTTCA CCGAGGACCC GCCGACCATA ACTCCTAGTA GCTCGTGGTT CACGCACTAC 
GAGGTTAGGT CGAGCTACAA GGCTCAGCAC TTCGTGGTCG TCTCCAGCCC CCTCCCCGTA 
ACGGTTAACG GTACGAGGAC TACGCGCTAC GCCGGGTGGC TCGACGCGGG CTCCTCCATA 
GTCGTCGAAG TCCCGGATCG GGTAGTGCTC GAGAACGGGA CGCTGTTCAC GCCCCTGAGT 
AGCGGCGGGG TGTTCCGCGT CGACTCGCCG GTAACAGTCG AGGTAGCCTG GCAACCCTAC 
TACCTCGTCA CCGTTACGAG CCAGTACCCG GTGCTCGTCA ACGGCGAGAG GACGGAGAGG 
TACAGCAGGT ACCTGGCGCC CGGCACCCAG CTCGAGGTGA AGGCGGAGCC CGTGCCGCTG 
TACGGCGGGC TCGTAACCAT GGACCCGAAC GCCTCTTCGA TAAGGCTACT GGTCACCGCG 
CCCGTAACGC TGTCGGTGTC CTACTCGCCG AACTACACGC GCCTAGTAGC CGTAGCCGCC 
GTAGCCACCG TTCTAGTCGC TGTAGCCGTC GCCAGGAGAA GGAGGCGCTT CGAGGCCTTC 
TACGAGCCAC CCCTCGACGA GCTCTTAGCC GCCTAG 

 

Protein sequence

MLVSRWLFRV GLVAVVLLLL VARCVRAERV SLLPRSISYY SIRVSAAPAY VVLVSHQPWP 
AVAYLATAEE CEHFLARGGS DIEVLRVVSV PGYGVVSLRI DSPGSYYVFF YSDERLYVYV 
RYYGLPAGLA SYPDVAVNTS MVLGFFNVSA ASAKSYSSRA AEADAWSLQL NAVVEVSLAG 
GRKQYYWVQN MVGGIEGTRS YENKTEKAIM YQVWNNIWNN TGRLSLLSDE RISGCGGVYR 
DRDEYYYACV YTYSPCDLPL AGFLVVRAYA SNGAVHVDFG YVTAQSGDYR PAIITWYDNV 
TIRTNPPAVG AGIVATSSYL NGRGLPLNVE LVFCGFCCSE HATFSELEAR LTLAYWRGGG 
WAPFPNLYSF GVSTNETATN VAVRYADGFA VVERGALSPA KLAERPRLPA LPMTSVRYCS 
MLTGECSVRY VYSPVTLAEK ASVVYDGNRT RYVLLGYYVD GRFTEDPPTI TPSSSWFTHY 
EVRSSYKAQH FVVVSSPLPV TVNGTRTTRY AGWLDAGSSI VVEVPDRVVL ENGTLFTPLS 
SGGVFRVDSP VTVEVAWQPY YLVTVTSQYP VLVNGERTER YSRYLAPGTQ LEVKAEPVPL 
YGGLVTMDPN ASSIRLLVTA PVTLSVSYSP NYTRLVAVAA VATVLVAVAV ARRRRRFEAF 
YEPPLDELLA A