| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1274 |
|---|
| Symbol | |
|---|
| ID | 4600741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1214307 |
|---|
| End bp | 1215764 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639774050 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_920675 |
|---|
| Protein GI | 119720180 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGACAC TCCTCTACGA CTTCAGGAGG GCCCTCCTGA ACTCATCCAC CCTGGTGCTC
CTAGCCGCGC TCGTAGCGGT CGGCGCCGCC GTCGGCTACA TGGCCTACGC TCAGATGACG
GGGCAGGGGA AGCTCTTCGG CATCGCGTAC ACCGTCACCC CGAACTCTTC CGCGGTGAAA
GTAGAGGGCC TCGTCTACGA CTACACGGGC AACCCCGTCA AGGACAACAC TGTGACCGTC
AAGCTCCTGG AGTGCTCCGA GGGAGGCGCC GGCGCCTCGA TGCCCGCGTG CAGCGTTGTA
GCGGAGTGGA CTGCTAGAAC CGGGGAGCGC TTCAAGGCGG AGCTCAGGCG CGGAAGCACC
AACGCGAGTG TAAACCTGGA GATACGGGTC GCGAACAGGT ACGGCTCCTC CCTCTCCTGG
TCCAGTGGGA TTAGGTGTTT TCCAGCGGAC ATGCACACCT CGCTCGGCAT AGGGTTCGGG
TCGACGTTTA ACAAGACGTG GCTCGCTGTA GGCGAGGTCA TACCCCTCGA GGGGGGAGGG
TACAGGCTAG CCGTGGCGGT AGCGCCCCCC GACTGCAACT ACTCCGAGGT CGCCGGGAGC
AAGCTGTACT ACACCGTCTA CAACGAGACC CCCGGGCGAC TCGCCTACGC AGGCGAGCTG
GGAGCAAGCG GGGTCGGGGT CTTCGACCTC AAGGCCGCGG GTAGCGGGAA GGCGCTCTAC
CTAGAGCTCG AAACGCGCCG GGGACGCGTG CGCCTAGACA CCCCTGTGTC GCTCGCCGGG
AGCTCGGCGC TCAAAGGGTG GATCGTAGCC GCGATGCTCG TATCGTCTAA CGTACTCGCC
TTCCTCTACC CGATAGCGGT GATGCTCACC GCATACAACC TCGTAGCGAA GCCGAGGTCC
ACCGGGGCTC TCGAATTCGT GCTCGCGAGG CCTGTTACGA GGCTCCAGCT CTTCCTCTCC
AGGTTCGCCG CCGGCGCGCT GGCGTCCGCC GCCTCCCCGC TACTCGCAAC AGCGGCCATG
CACCTAGTAA TCTCGTGGGC CGTTGGCTCG CCGCCACCCC TCGAGGACTC AGCCCTCCTC
GCAGCCGGCA TAGCCGCCTC GATGCTCGCG TACTACAGCG TGTTCTACTC GATAGCCGCA
TCAGCGAAGG GGAAGAGCTA CCTCCTCCTC GCGGTAGTAG TCTACATAGT CTTCACGGTG
CTCTGGGCGC CGATAGCGTT CGCCATCGCG GTCGCAGTTA GAGGAACGCC GGACCCCGCG
GCAGTCCAGC AGGCGTACTA CTTCAACCCT TCGGTAGCCT TCCAGGCAGC AACGGAAGCC
CTGCACCTCA AGTACGGGCA AGCAGCGGTG CAAGCCGCGC TGAAACCAGC CTACGTAGCC
GCCGCGGCGG CAGCCTGGGT ACTACTCCCA CTCGTAGCCG CGTGGCTAGC ATTCAGGAAG
GCAAACCTCT CCCAGTAG
|
|---|
| Protein sequence | MRTLLYDFRR ALLNSSTLVL LAALVAVGAA VGYMAYAQMT GQGKLFGIAY TVTPNSSAVK
VEGLVYDYTG NPVKDNTVTV KLLECSEGGA GASMPACSVV AEWTARTGER FKAELRRGST
NASVNLEIRV ANRYGSSLSW SSGIRCFPAD MHTSLGIGFG STFNKTWLAV GEVIPLEGGG
YRLAVAVAPP DCNYSEVAGS KLYYTVYNET PGRLAYAGEL GASGVGVFDL KAAGSGKALY
LELETRRGRV RLDTPVSLAG SSALKGWIVA AMLVSSNVLA FLYPIAVMLT AYNLVAKPRS
TGALEFVLAR PVTRLQLFLS RFAAGALASA ASPLLATAAM HLVISWAVGS PPPLEDSALL
AAGIAASMLA YYSVFYSIAA SAKGKSYLLL AVVVYIVFTV LWAPIAFAIA VAVRGTPDPA
AVQQAYYFNP SVAFQAATEA LHLKYGQAAV QAALKPAYVA AAAAAWVLLP LVAAWLAFRK
ANLSQ
|
|---|
| |