| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1261 |
|---|
| Symbol | |
|---|
| ID | 4600783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1197584 |
|---|
| End bp | 1197871 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639774037 |
|---|
| Product | Alba, DNA/RNA-binding protein |
|---|
| Protein accession | YP_920662 |
|---|
| Protein GI | 119720167 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1581] Archaeal DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00285] DNA-binding protein Alba |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGAGG AGGTGCTCCT CGTAGGCGAG AAGCCGGAGA GCGCCTACAC GCTTGAACTC
ATGACCATGC TGGGCAAGGG CGCGCCCCGC GTCGTAGTGA GGGCCGTCGG GAGGAACATC
TCTAAGGCTG TCTACGTCAC GGAGGGCGTC CGGCGCCTAA CGGGGGACAA GATAGCCTAC
GGGAAGATCA GGATATACTC GACGGAGGTC GGCGAGGTAA AGGAGGAAAA GTCCGTCCCG
GTGATAGAGA TAGAGGTAGT AAACCTGGGG GTGGAGCGCC GGGCGTAG
|
|---|
| Protein sequence | MGEEVLLVGE KPESAYTLEL MTMLGKGAPR VVVRAVGRNI SKAVYVTEGV RRLTGDKIAY
GKIRIYSTEV GEVKEEKSVP VIEIEVVNLG VERRA
|
|---|
| |