| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1236 |
|---|
| Symbol | |
|---|
| ID | 4601168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1173208 |
|---|
| End bp | 1173609 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639774012 |
|---|
| Product | CopG family transcriptional regulator |
|---|
| Protein accession | YP_920637 |
|---|
| Protein GI | 119720142 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGTA TTAGCCTCAC GGTGCCCGAC GAGGTCTACA AAGCCCTCGA GGAGCTCGCG
GAGAGGACGA GGATAAGTAA CCGCTCCAGG CTGGTCTCGG ACGCCATAAT GGCGTACGCC
TCGCAGAGCC TGGAGGACGG CGCGCGCTAT GCCGGGGCGA TAATAGTCCT CTACGACCAC
TCCCGGGGCG AGACAGTCTA CGGGGTCACA GACGCCCAGC ACGACTACCC CGAGATCTCC
GCGTCGCTCC ACATGCACCT CAGCGAGGAC CTCTGCCTGG AGGTTCTAGG GGTGCGGGGG
GAGGGTGGGA GGCTGAAGAA CCTGATCTCC GCCCTTCGCG GGGTTAGCGG GGTGATAACA
GTCCAGTACT CGCTCGTACG CCTAGACCAG GCAGTGCGCT AG
|
|---|
| Protein sequence | MRRISLTVPD EVYKALEELA ERTRISNRSR LVSDAIMAYA SQSLEDGARY AGAIIVLYDH
SRGETVYGVT DAQHDYPEIS ASLHMHLSED LCLEVLGVRG EGGRLKNLIS ALRGVSGVIT
VQYSLVRLDQ AVR
|
|---|
| |