Gene Tpen_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1235 
Symbol 
ID4601167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1171924 
End bp1173228 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content62% 
IMG OID639774011 
Productradical SAM domain-containing protein 
Protein accessionYP_920636 
Protein GI119720141 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.9409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCGCC GTCTTACAGT GGTTCTCATG GGGTACCCGG AGGGGCTGCA GGTAGAGCCT 
ACCAACGAGT GCAACCTGAG TTGCGTTATG TGCGTGAGGA GGACCTGGAG GGGCGGGGCT
TTCGGCTTCA TGGACCTCGG GCTTTACCGG AGGCTGGTGG ACGAGGGCTC CGGGAAGCTG
AGGAGGCTGG CTCTCTACGG GTTCGGGGAG CCCCTGCTTC ACCCCGGCTT CCCGGAGATG
GTTAGGTACG CTAGGGAGGT TCTCGGCGAC TCGGCCTACA TACTCACGGT TACCAACGGG
ACGCTTATGT CCCCGGCGAG GGCCGCGGAG GTCTTCGGGG CGGGGATAGA CGAGGTTGCG
TTCTCGGTGG ACGCGCCTGA GCTGGACCTC CTCTCCAGGA TAAGGGTGGG CGTTCAGTCG
TACGACGTTT TGGGGAACCT TAGGTCGGCG GCGAGGCTTA AGGAAGACTA CGGCGTGAGG
CTGGGCGTCT CGCTGGTGCT CATGAAGTCT AACTACAGGA GGCTTCCGAG GGTAGCCGAG
GCGGCGGGGG AGCTCGGGCT AGACTTCCTC GTCGTCTCGC ACGTCGTACC GTACTCGCCG
GGGATGGTCG GGGAAGCTGT TTACACGACG GCTAGCAGGT TCTCGGTGGA GTTCTACGAG
AAGAGCGGGC AGGACCTGAG CGTGTTAGCG CGTGAAGCCA TGCAGGACGA GTTCCTCCTG
CACTACACCT ACGCGTCGAG GGGTAAGAGG AAGCTGTACC TCCAGCTCGT AGACCGCCTG
GCGTCGAGCG GCTACAGCGT CAACGCCGAG ATAGCGAGGG ACGCTTTGTC GAAGAAGAGC
CTCTTCGAGG AGGTCCAGCT CTACCTGAAG GAAGCCGCTA GGATCGCAGA AGAGTACGGG
GTCGAGGTGA AGCTCCCCTC GCTGTACGCC GACGCGAAGA GGAGGTCCTG CCCCTACATA
GACTCCAACT ACGCGGTGGT ACTGTGGAAC GGGGACGTAG TACCATGCAT GGACCTCGCC
TACACGCACC CCCTATACAC GAACATGCAC TACAAGCTGG TGAGGCGCGT GGTATTCGGG
AACGCCTCCA GGGAGCCCCT CGGAGAGATA TGGGAAAGCC CGAGGTACAG GGCGTTCCGA
GAGGCCCGCA GGAAGCTCTC CGACAACGTG CCCTGGTGCG GAGACTGCCC CTTCGCTACC
TCGAACTGCT GGTACGTATC GGCGAACGAG TTCGACTGCT ACGGCAACGA GGTGGGCTGC
AACGAGTGCC TGTACAGCGC GGGGCTAGCG CACTGCCTGG TCTAG
 
Protein sequence
MGRRLTVVLM GYPEGLQVEP TNECNLSCVM CVRRTWRGGA FGFMDLGLYR RLVDEGSGKL 
RRLALYGFGE PLLHPGFPEM VRYAREVLGD SAYILTVTNG TLMSPARAAE VFGAGIDEVA
FSVDAPELDL LSRIRVGVQS YDVLGNLRSA ARLKEDYGVR LGVSLVLMKS NYRRLPRVAE
AAGELGLDFL VVSHVVPYSP GMVGEAVYTT ASRFSVEFYE KSGQDLSVLA REAMQDEFLL
HYTYASRGKR KLYLQLVDRL ASSGYSVNAE IARDALSKKS LFEEVQLYLK EAARIAEEYG
VEVKLPSLYA DAKRRSCPYI DSNYAVVLWN GDVVPCMDLA YTHPLYTNMH YKLVRRVVFG
NASREPLGEI WESPRYRAFR EARRKLSDNV PWCGDCPFAT SNCWYVSANE FDCYGNEVGC
NECLYSAGLA HCLV