Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1235 |
Symbol | |
ID | 4601167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 1171924 |
End bp | 1173228 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639774011 |
Product | radical SAM domain-containing protein |
Protein accession | YP_920636 |
Protein GI | 119720141 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.9409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCGCC GTCTTACAGT GGTTCTCATG GGGTACCCGG AGGGGCTGCA GGTAGAGCCT ACCAACGAGT GCAACCTGAG TTGCGTTATG TGCGTGAGGA GGACCTGGAG GGGCGGGGCT TTCGGCTTCA TGGACCTCGG GCTTTACCGG AGGCTGGTGG ACGAGGGCTC CGGGAAGCTG AGGAGGCTGG CTCTCTACGG GTTCGGGGAG CCCCTGCTTC ACCCCGGCTT CCCGGAGATG GTTAGGTACG CTAGGGAGGT TCTCGGCGAC TCGGCCTACA TACTCACGGT TACCAACGGG ACGCTTATGT CCCCGGCGAG GGCCGCGGAG GTCTTCGGGG CGGGGATAGA CGAGGTTGCG TTCTCGGTGG ACGCGCCTGA GCTGGACCTC CTCTCCAGGA TAAGGGTGGG CGTTCAGTCG TACGACGTTT TGGGGAACCT TAGGTCGGCG GCGAGGCTTA AGGAAGACTA CGGCGTGAGG CTGGGCGTCT CGCTGGTGCT CATGAAGTCT AACTACAGGA GGCTTCCGAG GGTAGCCGAG GCGGCGGGGG AGCTCGGGCT AGACTTCCTC GTCGTCTCGC ACGTCGTACC GTACTCGCCG GGGATGGTCG GGGAAGCTGT TTACACGACG GCTAGCAGGT TCTCGGTGGA GTTCTACGAG AAGAGCGGGC AGGACCTGAG CGTGTTAGCG CGTGAAGCCA TGCAGGACGA GTTCCTCCTG CACTACACCT ACGCGTCGAG GGGTAAGAGG AAGCTGTACC TCCAGCTCGT AGACCGCCTG GCGTCGAGCG GCTACAGCGT CAACGCCGAG ATAGCGAGGG ACGCTTTGTC GAAGAAGAGC CTCTTCGAGG AGGTCCAGCT CTACCTGAAG GAAGCCGCTA GGATCGCAGA AGAGTACGGG GTCGAGGTGA AGCTCCCCTC GCTGTACGCC GACGCGAAGA GGAGGTCCTG CCCCTACATA GACTCCAACT ACGCGGTGGT ACTGTGGAAC GGGGACGTAG TACCATGCAT GGACCTCGCC TACACGCACC CCCTATACAC GAACATGCAC TACAAGCTGG TGAGGCGCGT GGTATTCGGG AACGCCTCCA GGGAGCCCCT CGGAGAGATA TGGGAAAGCC CGAGGTACAG GGCGTTCCGA GAGGCCCGCA GGAAGCTCTC CGACAACGTG CCCTGGTGCG GAGACTGCCC CTTCGCTACC TCGAACTGCT GGTACGTATC GGCGAACGAG TTCGACTGCT ACGGCAACGA GGTGGGCTGC AACGAGTGCC TGTACAGCGC GGGGCTAGCG CACTGCCTGG TCTAG
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Protein sequence | MGRRLTVVLM GYPEGLQVEP TNECNLSCVM CVRRTWRGGA FGFMDLGLYR RLVDEGSGKL RRLALYGFGE PLLHPGFPEM VRYAREVLGD SAYILTVTNG TLMSPARAAE VFGAGIDEVA FSVDAPELDL LSRIRVGVQS YDVLGNLRSA ARLKEDYGVR LGVSLVLMKS NYRRLPRVAE AAGELGLDFL VVSHVVPYSP GMVGEAVYTT ASRFSVEFYE KSGQDLSVLA REAMQDEFLL HYTYASRGKR KLYLQLVDRL ASSGYSVNAE IARDALSKKS LFEEVQLYLK EAARIAEEYG VEVKLPSLYA DAKRRSCPYI DSNYAVVLWN GDVVPCMDLA YTHPLYTNMH YKLVRRVVFG NASREPLGEI WESPRYRAFR EARRKLSDNV PWCGDCPFAT SNCWYVSANE FDCYGNEVGC NECLYSAGLA HCLV
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