| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1230 |
|---|
| Symbol | |
|---|
| ID | 4601162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1168141 |
|---|
| End bp | 1168674 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639774006 |
|---|
| Product | flavin reductase domain-containing protein |
|---|
| Protein accession | YP_920631 |
|---|
| Protein GI | 119720136 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.407466 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAGG TGGAAAGGTT CTACCTGGTG TTGCACCCGA GGCCTGCGTA CATAATCGGG
AGCGGGAGGG TGGGCGAGAA GGCGAACTTC ATGGCGGCTT CCTGGGTGAC CCCCGTAGCC
GAGGAGCCGC CCCTCGTCGG AGTTGCGATC GACGTGGAGA GCTTGACGCA CGAGCTGATA
GAGAGGTACG GGGAGTTCAC CGTGAACGTG GTTCCTACGA GCATGCTGGA CAAGCTCTAC
TACGCCGGTA GCAGGAGCGG TAGGGACGAG GACAAGGCTT CCTCCATTCC GCACAGGAAG
GGGGAGAAGG TGTCGGCGCC CGTAGTCGAA GGCGCCGTGG GGGTCGTCGA GTGCGTGGTT
CACGGGAAGC TTAGAGCGGA GGACGTGACG TTCTTCGCGG GGAGGGTCGT GTACGCGGCT
GTCGACGAGC GCTTCTTCAA CGAGAGGAGC GGCTGGCTCT TCAAGGAGAT AGACCTCCCA
CTGCACAACT GGGGTAGGGG CTTCTACGGG GTGGGGCGCT TCTACAAGGC TTAG
|
|---|
| Protein sequence | MKEVERFYLV LHPRPAYIIG SGRVGEKANF MAASWVTPVA EEPPLVGVAI DVESLTHELI
ERYGEFTVNV VPTSMLDKLY YAGSRSGRDE DKASSIPHRK GEKVSAPVVE GAVGVVECVV
HGKLRAEDVT FFAGRVVYAA VDERFFNERS GWLFKEIDLP LHNWGRGFYG VGRFYKA
|
|---|
| |