| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1222 |
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| Symbol | |
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| ID | 4601719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1159375 |
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| End bp | 1160334 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639773998 |
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| Product | ABC transporter related |
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| Protein accession | YP_920623 |
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| Protein GI | 119720128 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.132498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGAG GGGTAGCGGT AAAGATATCC AACTTCGTCA AGAAGTTCGG GGATACCGTA
GCAGTAGACG GGCTGAACCT CGACATATAC GAGGGGGAGA TATTCGGGCT TCTAGGCCCC
AACGGCTCCG GGAAGACCAC GACCCTCCTA ACCATAGCCA CCGTGTACAA GCCTACCTCC
GGCGACATCT ACGTCCACGG ATACTCCGTG TCGAGGCAGG GGGACATCGT GAGGAAGTAC
GTGGGGATAG CCTTCCAGGA GCCTAAGGCT CTCTGGGTGG ACACGCCGTA CGAGCTCCTG
CTGTGGCACG CAAGGGTCGT CGGGTACTCT TCCTCGGAGG CGCGGGCAGT CGTGAAGGAG
GTTATGGAGC AGCTTAACCT GTGGGAGCAC AGGAAGAAGC AGTTCTACCA GCTGAGCGGG
GGTACGAGGA AGAAGCTCGA GATAGCGAAG GTGTTGATAC AGAGGCCGAA GGTGGCGATA
TTCGACGAGC CGACCGCGCA GGTAGACGTC CTCACGAAGC ACGCGCTTTG GGACATTATA
AGGGGTCTCC GCGATGAGGG AACCACGGTT ATCGTAGCTA CGAACGATAT GTTCGAGGCG
GAGAGGATCT GCGAGAGGCT GGGCATAATA TACAAGGGGA AGCTACGCGC GCTGGGCACC
GTGAGCGAGC TCAAGGACAT GGTCCCGGCC GGCGACGTCA TTGAGATTTC CTTCGAGGGG
CCCGAGGAAA ACGTGAGGAA GCTCCTCTCG GAGCTGGAGG GCGTGAGCAA CTACACGGTG
ACTGACCACA GCCTGAGGAT CCACCTGAAC AGGGGGGAGG AGAGGGCGGC CGAAATCGTG
GAGCTCCTGG CGTCCTCCGG CGTGAAGGTT AGGAAGCTGA TGGTTCACGA GCCTACGCTC
GACGACGTAT TCTTCTACTT CACCGGGGCG AGGCTGAGGG AGGAGCATGG AGCTACTTAA
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| Protein sequence | MSRGVAVKIS NFVKKFGDTV AVDGLNLDIY EGEIFGLLGP NGSGKTTTLL TIATVYKPTS
GDIYVHGYSV SRQGDIVRKY VGIAFQEPKA LWVDTPYELL LWHARVVGYS SSEARAVVKE
VMEQLNLWEH RKKQFYQLSG GTRKKLEIAK VLIQRPKVAI FDEPTAQVDV LTKHALWDII
RGLRDEGTTV IVATNDMFEA ERICERLGII YKGKLRALGT VSELKDMVPA GDVIEISFEG
PEENVRKLLS ELEGVSNYTV TDHSLRIHLN RGEERAAEIV ELLASSGVKV RKLMVHEPTL
DDVFFYFTGA RLREEHGAT
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