Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1208 |
Symbol | |
ID | 4600410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 1147136 |
End bp | 1148098 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639773984 |
Product | sugar binding protein of ABC transporter |
Protein accession | YP_920609 |
Protein GI | 119720114 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0308996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCCCT ACTCCAAGTA CGCCGAGCTC GAAAAGAAGC TCGAACAGCT ACAAGCCGGC GCCGCCGCCC CGGAGTACAC GTTCTACTAC GTCTCCCACG GAGGCCCCGC TGACCCGTGG TGGGCCCCAG TAATCAAGGG ATCCCAGGAC GCGGCGAGGC TCCTCAACGT GAAGGTCGTG TACAGCGGGC CCGAGAAGTT CAGCATACAG GCCCTGGTCG ACCTGCTGAA CAGTGCTATC GCGGCTAAGC CTCAGGGCAT TATACTCACG ATCACGGACT ACAAGGCGCT CGACGAGCCG GCGAGGAGGG CTATCGCGCA GGGAATACCC ATAATTGCCG TCAACGTCCC TGACCCCAGG CCGCCGAACG AGAGGATACC CTACCTTAGC TACGTCGGGC AGAACGAGTA CGACGCTGGC TACTACCTAG CCAAGTACCT TGTAGACAAG GGCTACAAGC CGAAGCGCGT AGTGATAGGG ATACACGAGG TAGGGCACAT AGGTCTCGAG ACAAGGGCGA AGGGGATAAC CGACGCGATC ACCCAGGCGT ACCCGGGGAC ACCCGTCGAG AAGCTCGACA TAACGACGGA CCCGACGAAG GCCGCGGAGG TCTTTAAGAG CTACCTAACC GCGCACCCGG ACACCGACGT CATATTCACG CTCGGACCCC TCGGGGCCCA CCCGGCGCTC CAGGTTCTCC GCGAGATGAA GCTAACGGGC AAGGTCCACC TCCTAACCGT CGATATCGAC AACGTGATAC TTAAAGCCAT AGAGGCTGGA GAGCTCGACG CGGCTGTAAG CCAGCAGCCC TACGCGCAGG GCTTCCTGCC CGTAGTCTTC ATGTACCTCT ACGTGAAGTA CGGGATAATC CCGCCGCCCC AGGTGCCGAC AGGGCCCACC GTTATCGACA AGGCGAAGCT GGAGACCGTG AAGAAGCAGA TAGCGACGAC AGGGGGAGCC TAA
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Protein sequence | MVPYSKYAEL EKKLEQLQAG AAAPEYTFYY VSHGGPADPW WAPVIKGSQD AARLLNVKVV YSGPEKFSIQ ALVDLLNSAI AAKPQGIILT ITDYKALDEP ARRAIAQGIP IIAVNVPDPR PPNERIPYLS YVGQNEYDAG YYLAKYLVDK GYKPKRVVIG IHEVGHIGLE TRAKGITDAI TQAYPGTPVE KLDITTDPTK AAEVFKSYLT AHPDTDVIFT LGPLGAHPAL QVLREMKLTG KVHLLTVDID NVILKAIEAG ELDAAVSQQP YAQGFLPVVF MYLYVKYGII PPPQVPTGPT VIDKAKLETV KKQIATTGGA
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