Gene Tpen_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1208 
Symbol 
ID4600410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1147136 
End bp1148098 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content61% 
IMG OID639773984 
Productsugar binding protein of ABC transporter 
Protein accessionYP_920609 
Protein GI119720114 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0308996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCCCT ACTCCAAGTA CGCCGAGCTC GAAAAGAAGC TCGAACAGCT ACAAGCCGGC 
GCCGCCGCCC CGGAGTACAC GTTCTACTAC GTCTCCCACG GAGGCCCCGC TGACCCGTGG
TGGGCCCCAG TAATCAAGGG ATCCCAGGAC GCGGCGAGGC TCCTCAACGT GAAGGTCGTG
TACAGCGGGC CCGAGAAGTT CAGCATACAG GCCCTGGTCG ACCTGCTGAA CAGTGCTATC
GCGGCTAAGC CTCAGGGCAT TATACTCACG ATCACGGACT ACAAGGCGCT CGACGAGCCG
GCGAGGAGGG CTATCGCGCA GGGAATACCC ATAATTGCCG TCAACGTCCC TGACCCCAGG
CCGCCGAACG AGAGGATACC CTACCTTAGC TACGTCGGGC AGAACGAGTA CGACGCTGGC
TACTACCTAG CCAAGTACCT TGTAGACAAG GGCTACAAGC CGAAGCGCGT AGTGATAGGG
ATACACGAGG TAGGGCACAT AGGTCTCGAG ACAAGGGCGA AGGGGATAAC CGACGCGATC
ACCCAGGCGT ACCCGGGGAC ACCCGTCGAG AAGCTCGACA TAACGACGGA CCCGACGAAG
GCCGCGGAGG TCTTTAAGAG CTACCTAACC GCGCACCCGG ACACCGACGT CATATTCACG
CTCGGACCCC TCGGGGCCCA CCCGGCGCTC CAGGTTCTCC GCGAGATGAA GCTAACGGGC
AAGGTCCACC TCCTAACCGT CGATATCGAC AACGTGATAC TTAAAGCCAT AGAGGCTGGA
GAGCTCGACG CGGCTGTAAG CCAGCAGCCC TACGCGCAGG GCTTCCTGCC CGTAGTCTTC
ATGTACCTCT ACGTGAAGTA CGGGATAATC CCGCCGCCCC AGGTGCCGAC AGGGCCCACC
GTTATCGACA AGGCGAAGCT GGAGACCGTG AAGAAGCAGA TAGCGACGAC AGGGGGAGCC
TAA
 
Protein sequence
MVPYSKYAEL EKKLEQLQAG AAAPEYTFYY VSHGGPADPW WAPVIKGSQD AARLLNVKVV 
YSGPEKFSIQ ALVDLLNSAI AAKPQGIILT ITDYKALDEP ARRAIAQGIP IIAVNVPDPR
PPNERIPYLS YVGQNEYDAG YYLAKYLVDK GYKPKRVVIG IHEVGHIGLE TRAKGITDAI
TQAYPGTPVE KLDITTDPTK AAEVFKSYLT AHPDTDVIFT LGPLGAHPAL QVLREMKLTG
KVHLLTVDID NVILKAIEAG ELDAAVSQQP YAQGFLPVVF MYLYVKYGII PPPQVPTGPT
VIDKAKLETV KKQIATTGGA