Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1193 |
Symbol | |
ID | 4600385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1132325 |
End bp | 1133083 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639773969 |
Product | threonyl/alanyl tRNA synthetase, SAD |
Protein accession | YP_920594 |
Protein GI | 119720099 |
COG category | [R] General function prediction only |
COG ID | [COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTTATCGC TAGGGCCCTG CCCTGAGAGG TGGTGCCCGC TGACCGAGGA GCTCTTTCTG AGGGACTCCT ACTTGAGGAG CTGCGAGGCC ACGGTTACAG GGGTCGAGCT TCTCAAGGGG TCTAAGGCCT ACGTGGAGCT GGACAGGACG ATCTTCCACC CGCTCGGCGG CGGACAACCC TCGGACGAGG GCTCTATAGT CTCGCCCCGC GGCGCCTTCG CGGTGAAGAA AGCGATCAGG GATAGAGGTA GGATCAGGCA CTGGGGGAGG ATCGAGGCTG GAAGCTTGGA GGTAGGAGAC ACCGTGCGGT GCGAGCTGAA CTGGGAGAAG AGGTACTTAG TGATGAGGCT ACACACCGCT GGACACATAC TGGACTACGC GATGCTCAGG CTTTACGGGC GGCTCGTCGA GACGCTTGAC GCTTTCCACG GGCCCCCGGA GGCCTACCTC GTGTACAGCG TGAGCGAGCC GCCCGACGCG TACAGGCTGG AGGAGGAGGC GAACAAGGTC GTAGAGAGGG GGTTGAGCGT CGCCGTGAAG TTCGTACCTC GGGGAGAGCT ACAAGCCCAC ATATACAACG CCCCCAACGT CTCCAGGCTC CCGCCCTCCG AGGAGTACCG GGTCGTCGAG ATCCCCGGGG TGAACGCGAT GCCTTGCACC GGTACCCACG TCTCGAACAC GAGGGAGGTT GGGCGGATCA AGGTGCTCGG CGTGGAGAGG GAGGTTGTCG GGGTCAAGGT AAGGTACACC GTTGTCTAG
|
Protein sequence | MLSLGPCPER WCPLTEELFL RDSYLRSCEA TVTGVELLKG SKAYVELDRT IFHPLGGGQP SDEGSIVSPR GAFAVKKAIR DRGRIRHWGR IEAGSLEVGD TVRCELNWEK RYLVMRLHTA GHILDYAMLR LYGRLVETLD AFHGPPEAYL VYSVSEPPDA YRLEEEANKV VERGLSVAVK FVPRGELQAH IYNAPNVSRL PPSEEYRVVE IPGVNAMPCT GTHVSNTREV GRIKVLGVER EVVGVKVRYT VV
|
| |