Gene Tpen_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1193 
Symbol 
ID4600385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1132325 
End bp1133083 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content63% 
IMG OID639773969 
Productthreonyl/alanyl tRNA synthetase, SAD 
Protein accessionYP_920594 
Protein GI119720099 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTATCGC TAGGGCCCTG CCCTGAGAGG TGGTGCCCGC TGACCGAGGA GCTCTTTCTG 
AGGGACTCCT ACTTGAGGAG CTGCGAGGCC ACGGTTACAG GGGTCGAGCT TCTCAAGGGG
TCTAAGGCCT ACGTGGAGCT GGACAGGACG ATCTTCCACC CGCTCGGCGG CGGACAACCC
TCGGACGAGG GCTCTATAGT CTCGCCCCGC GGCGCCTTCG CGGTGAAGAA AGCGATCAGG
GATAGAGGTA GGATCAGGCA CTGGGGGAGG ATCGAGGCTG GAAGCTTGGA GGTAGGAGAC
ACCGTGCGGT GCGAGCTGAA CTGGGAGAAG AGGTACTTAG TGATGAGGCT ACACACCGCT
GGACACATAC TGGACTACGC GATGCTCAGG CTTTACGGGC GGCTCGTCGA GACGCTTGAC
GCTTTCCACG GGCCCCCGGA GGCCTACCTC GTGTACAGCG TGAGCGAGCC GCCCGACGCG
TACAGGCTGG AGGAGGAGGC GAACAAGGTC GTAGAGAGGG GGTTGAGCGT CGCCGTGAAG
TTCGTACCTC GGGGAGAGCT ACAAGCCCAC ATATACAACG CCCCCAACGT CTCCAGGCTC
CCGCCCTCCG AGGAGTACCG GGTCGTCGAG ATCCCCGGGG TGAACGCGAT GCCTTGCACC
GGTACCCACG TCTCGAACAC GAGGGAGGTT GGGCGGATCA AGGTGCTCGG CGTGGAGAGG
GAGGTTGTCG GGGTCAAGGT AAGGTACACC GTTGTCTAG
 
Protein sequence
MLSLGPCPER WCPLTEELFL RDSYLRSCEA TVTGVELLKG SKAYVELDRT IFHPLGGGQP 
SDEGSIVSPR GAFAVKKAIR DRGRIRHWGR IEAGSLEVGD TVRCELNWEK RYLVMRLHTA
GHILDYAMLR LYGRLVETLD AFHGPPEAYL VYSVSEPPDA YRLEEEANKV VERGLSVAVK
FVPRGELQAH IYNAPNVSRL PPSEEYRVVE IPGVNAMPCT GTHVSNTREV GRIKVLGVER
EVVGVKVRYT VV