Gene Tpen_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1180 
Symbol 
ID4602046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1121003 
End bp1122259 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content63% 
IMG OID639773956 
Productradical SAM domain-containing protein 
Protein accessionYP_920581 
Protein GI119720086 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.832103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGTAC GTATGAGCAG GGTTCTGCCC TGGTACGTCC CGCCCACGCT CTTCGTGCGG 
CAGGTTTTAT CCGCGGCGAC CGTCCGGAGT GCTACGGGTT GGTCTCCCGG CTCGCGGTGG
GTGAAGTCGC TGTCCTCCCT GCTGAGAAGC GCCAACGGGG CTAAAGCCAT GGGGTGTTTC
GGCTACGCCC CGCACCCCGT CTACGAGGTG ACTGCCGCGT GCAACTTGAG GTGTGCGCAC
TGCCACGCGT CCGCCGGGAG GCCTTACCCC GGGGAGCTCG ACACCGAGGG CGCGAAGAGG
GTTATAGAGA GCCTCACGAC CGTGAAGGAC TTCAGAACCC TCGTCTTCAC GGGCGGGGAG
CCCCTCGTGA GGAAGGACAT ATGGGAGCTG ACCAGGCACG CGGTAGACCT GGGCTTCGGG
GTCGTATTCG CAACGAACGG GGTTCTCGTC AGCGAGAGTG TCGCCGCCGA GATGCGGAGG
CTGGGCGTCC TGGGCGCAGC CGTGAGCCTG GACTCTTCAA GGCCGCTTGT ACACGACAAG
CTGAGAGGCG TCCCGGGCGC CTGGAGGGGA GCGGTGAGGG GGATCAAGAA CCTCTTGAAA
GAGGGCCTAT ACGTGCAGGT AAACATAACC GCGAACAGGC TTAACGTCGA CGAAATAGAG
GATGTAGTGA GACTCGCAGA CTCGCTGGGC TCCCACGTGA TCTTTCTCTA CACGTTCGTC
TCCGTGGGGA GAGGATCGTC CAACGACTGG CTCTCCTTAA CCCCGGAGGA ATTCGTAAAG
CTCTCCAGGA GGATCCTAAA GGTTCAGGGA GAGGTGCAGA GCCTAATCAT ACCAGTCGCC
ATGCCGTGGT ACTTCCCCCT CCTCCTGCAG GAAGCCCGGC TCAAACCCGA GGTGGCGTCG
AGGTGGGTAT CCGGGTGCAT AGCGGCTAGG GGGATGTTCT ACGTAAAGCC CAACGGGGAC
GCCTGGCCCT GCGCCTTCAT ACCCGTCTCA GGGGGAAACG TCGCCCGGCA ACCAGCCATC
GAGGTGTGGG AGGGAGACCT CTTCAAGGCG ATACGGAACA GGGAGAACCT CGAGGAGCCC
TGCAGGAGTT GCAGGTTCAG GGAGGTCTGC GGAGGGTGCA GGTCGAGAGC CTACCTAGCA
ACCGGGAGAC TGACAGCCCC AGACCCGCTG TGCCCCCTCG TGCGCCGAAG GCTAAGCACC
TCAACGGCAC CGAGCGGTCC ACTACAGCCC GCCGCCAAGA GCGGCGAGCC TAACTAG
 
Protein sequence
MGVRMSRVLP WYVPPTLFVR QVLSAATVRS ATGWSPGSRW VKSLSSLLRS ANGAKAMGCF 
GYAPHPVYEV TAACNLRCAH CHASAGRPYP GELDTEGAKR VIESLTTVKD FRTLVFTGGE
PLVRKDIWEL TRHAVDLGFG VVFATNGVLV SESVAAEMRR LGVLGAAVSL DSSRPLVHDK
LRGVPGAWRG AVRGIKNLLK EGLYVQVNIT ANRLNVDEIE DVVRLADSLG SHVIFLYTFV
SVGRGSSNDW LSLTPEEFVK LSRRILKVQG EVQSLIIPVA MPWYFPLLLQ EARLKPEVAS
RWVSGCIAAR GMFYVKPNGD AWPCAFIPVS GGNVARQPAI EVWEGDLFKA IRNRENLEEP
CRSCRFREVC GGCRSRAYLA TGRLTAPDPL CPLVRRRLST STAPSGPLQP AAKSGEPN