Gene Tpen_1178 details

Gene Information

• Locus tag: Tpen_1178
• ID: 4602044
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1119502
• End bp: 1120104
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639773954
• Product: metal dependent phosphohydrolase
• Protein accession: YP_920579
• Protein GI: 119720084
• COG category: [R] General function prediction only
• COG ID: [COG1896] Predicted hydrolases of HD superfamily
• TIGRFAM ID: [TIGR00277] uncharacterized domain HDIG

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.30163
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAGTGGG AGCGCCTGCT CAGCTTGAGG CACCTTCCGC GGACTGGCTG GGTTCTGCGC 
GGAGTCCCAG CATCCATAGC GGAGACAGTC GCCGACCACT CGTTTCTCAC AGCCCTCGTA 
GCGATCGACG TAGCCCGCCG CGCCAGGGAG CGGGGCTTCG AACTCGAACT CGAGAAGGTT 
CTAGCAATGA GCATTCTCCA CGACGTGGCC GAAGCGGTTA CGGGGGACGT CGTGAGGTAC 
GTCAAGCAGC TGGACGAGGA GCTGTTCGGA AAAGCGGAGG AAGAGGCCCT CCGGAGCCTC 
GGGCTCGGGG CGTACAGCGC CCTACTCGCA GAGCTGAGGA GGCTTGAGAG CCCGGAAGCC 
CTGGTCGTCA AAGCGAGCGA CGACCTGGCT ACGATAATAG AGGGCTCCAG GCTCCTCAGG 
CAGGGATACG CGGGGGTTGA AGAGATACTG GACAATGTGT GCAGGCACGT TGAAGAACTC 
TCGGCGAGGG CGAGGAGAGA GTTCGGGGAC TCTCTGGCCG ACGCCGTAGA GGCTGTCCTC 
AAGGATTCGG GAGCCTACTG CCCTCCACGC TCCCAGCCGC GGCGCGGGGA AAGCTTACCC 
TAA 

 

Protein sequence

MEWERLLSLR HLPRTGWVLR GVPASIAETV ADHSFLTALV AIDVARRARE RGFELELEKV 
LAMSILHDVA EAVTGDVVRY VKQLDEELFG KAEEEALRSL GLGAYSALLA ELRRLESPEA 
LVVKASDDLA TIIEGSRLLR QGYAGVEEIL DNVCRHVEEL SARARREFGD SLADAVEAVL 
KDSGAYCPPR SQPRRGESLP